Strain Fitness in Sinorhizobium meliloti 1021 around SMc04280

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,203,904	-		SMc04276	0.80	+0.9
2,203,904	-		SMc04276	0.80	+0.0
2,203,952	+				-0.2
2,203,952	+				-0.2
2,203,953	-				+0.5
2,204,046	+				+0.3
2,204,187	+				+1.9
2,204,187	+				+0.1
2,204,187	+				-1.3
2,204,264	-				+1.0
2,204,264	-				-0.5
2,204,367	+				+0.0
2,204,468	+				-0.3
2,204,601	+				+1.4
2,204,810	+				+0.3
2,204,824	-				+0.7
2,204,824	-				+0.1
2,204,859	+				+1.4
2,204,859	+				-0.1
2,204,859	+				+0.3
2,204,934	-		SMc04280	0.11	+0.2
2,204,934	-		SMc04280	0.11	-0.0
2,204,960	+		SMc04280	0.13	-0.3
2,204,960	+		SMc04280	0.13	-2.4
2,204,961	-		SMc04280	0.13	-0.2
2,205,075	+		SMc04280	0.22	-0.3
2,205,076	-		SMc04280	0.22	-0.5
2,205,194	+		SMc04280	0.31	-0.1
2,205,194	+		SMc04280	0.31	-2.3
2,205,194	+		SMc04280	0.31	-1.0
2,205,194	+		SMc04280	0.31	+0.4
2,205,194	+		SMc04280	0.31	-0.6
2,205,194	+		SMc04280	0.31	+0.9
2,205,194	+		SMc04280	0.31	-0.7
2,205,195	-		SMc04280	0.31	-0.4
2,205,243	-		SMc04280	0.35	-1.3
2,205,243	-		SMc04280	0.35	-0.3
2,205,243	-		SMc04280	0.35	+0.1
2,205,269	+		SMc04280	0.36	-0.7
2,205,269	+		SMc04280	0.36	-0.4
2,205,269	+		SMc04280	0.36	+0.1
2,205,269	+		SMc04280	0.36	-0.7
2,205,270	-		SMc04280	0.37	+0.1
2,205,270	-		SMc04280	0.37	+0.4
2,205,270	-		SMc04280	0.37	-0.3
2,205,270	-		SMc04280	0.37	-0.7
2,205,413	-		SMc04280	0.47	-0.7
2,205,454	+		SMc04280	0.50	-0.5
2,205,454	+		SMc04280	0.50	-0.1
2,205,473	+		SMc04280	0.52	-0.3
2,205,473	+		SMc04280	0.52	+0.4
2,205,474	-		SMc04280	0.52	-1.0
2,205,491	+		SMc04280	0.53	-2.2
2,205,528	+		SMc04280	0.56	-0.0
2,205,529	-		SMc04280	0.56	-1.2
2,205,530	+		SMc04280	0.56	-0.3
2,205,531	-		SMc04280	0.56	+0.3
2,205,748	-		SMc04280	0.72	-0.1
2,205,754	-		SMc04280	0.73	+0.3
2,205,754	-		SMc04280	0.73	-0.1
2,205,782	-		SMc04280	0.75	+0.6
2,205,854	+		SMc04280	0.80	-0.9
2,205,854	+		SMc04280	0.80	-0.2
2,205,855	-				+0.7
2,205,855	-		SMc04280	0.80	-0.2
2,205,888	-		SMc04280	0.83	-0.4
2,205,918	-		SMc04280	0.85	-1.4
2,205,980	+		SMc04280	0.90	+0.3
2,206,116	+				-1.3
2,206,116	+				-0.4
2,206,116	+				-0.1
2,206,117	-				-0.1
2,206,151	-				-0.0
2,206,157	+				-0.3
2,206,158	-				-0.2
2,206,242	+				-0.0
2,206,242	+				-0.6
2,206,242	+				+0.0
2,206,242	+				-0.3
2,206,243	-				-0.1
2,206,370	+				+1.1
2,206,370	+				-0.4
2,206,378	+				-0.2
2,206,421	+				-0.6
2,206,465	+				-0.0
2,206,466	-				-0.3
2,206,497	-				-0.3
2,206,497	-				+0.2
2,206,497	-				+0.2
2,206,513	+				-1.1
2,206,541	+				-0.5
2,206,541	+				-1.6
2,206,541	+				-0.5
2,206,542	-				-0.4
2,206,542	-				+0.8
2,206,661	-				-0.1
2,206,663	-				-0.2
2,206,697	-				+0.1
2,206,698	+				-0.2
2,206,698	+				-0.5
2,206,698	+				-0.5
2,206,698	+				-0.5
2,206,698	+				-0.1
2,206,699	-				+0.5
2,206,699	-				-0.1
2,206,699	-				+0.2
2,206,699	-				+0.5
2,206,699	-				+0.3
2,206,699	-				-0.0
2,206,734	+				-0.1
2,206,735	-				+0.7
2,206,735	-				-0.1
2,206,735	-				-2.2
2,206,735	-				-0.0
2,206,735	-				-1.5
2,206,797	+				-0.7
2,206,798	-				+0.6
2,206,801	-				+0.2
2,206,801	-				-0.6
2,206,801	-				+0.7