Strain Fitness in Sinorhizobium meliloti 1021 around SMc04014

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
3,009,772	-		SMc04013	0.36	+0.1
3,009,772	-		SMc04013	0.36	+0.6
3,009,772	-		SMc04013	0.36	+0.9
3,009,865	-		SMc04013	0.44	-1.0
3,010,279	+		SMc04013	0.79	+0.1
3,010,279	+		SMc04013	0.79	+0.5
3,010,315	-		SMc04013	0.82	-0.9
3,010,315	-		SMc04013	0.82	+0.6
3,010,315	-		SMc04013	0.82	+1.1
3,010,459	-				-0.2
3,010,547	+		SMc04014	0.12	+0.3
3,010,935	+		SMc04014	0.69	+0.5
3,010,935	+		SMc04014	0.69	+0.8
3,010,936	-		SMc04014	0.70	+0.3
3,010,936	-		SMc04014	0.70	+1.4
3,011,090	+				-0.6
3,011,106	+				-0.2
3,011,107	-				-0.1
3,011,152	+				-0.5
3,011,193	+				-0.4
3,011,217	+		SMc04015	0.12	+0.0
3,011,217	+		SMc04015	0.12	-0.6
3,011,217	+		SMc04015	0.12	+0.1
3,011,218	-		SMc04015	0.12	+0.2
3,011,218	-		SMc04015	0.12	-0.4
3,011,274	+		SMc04015	0.18	-0.4
3,011,274	+		SMc04015	0.18	-1.6
3,011,274	+		SMc04015	0.18	-0.1
3,011,275	-		SMc04015	0.18	+1.4
3,011,511	+		SMc04015	0.44	-0.5
3,011,596	+		SMc04015	0.53	-0.3
3,011,596	+		SMc04015	0.53	-0.0
3,011,597	-		SMc04015	0.53	+0.2
3,011,599	-		SMc04015	0.53	+0.1
3,011,690	+		SMc04015	0.63	-0.2
3,011,690	+		SMc04015	0.63	+0.6
3,011,698	+		SMc04015	0.64	+0.7
3,011,698	+		SMc04015	0.64	-0.1
3,011,938	-				-0.5
3,011,989	-				-0.9
3,012,098	-				-0.0
3,012,098	-				-1.1