Strain Fitness in Sinorhizobium meliloti 1021 around SMc03293

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
3,408,478	-				-0.1
3,408,478	-				+0.3
3,408,478	-				+0.8
3,408,478	-				+1.2
3,408,710	-				-0.6
3,408,763	-				+0.3
3,408,812	+				-0.4
3,408,832	-				+0.3
3,408,832	-				+0.9
3,408,834	+				+1.3
3,408,987	+				-0.2
3,408,987	+				+0.3
3,408,987	+				+0.0
3,408,987	+				+0.3
3,408,987	+				+0.0
3,408,987	+				+0.3
3,408,987	+				+0.3
3,408,987	+				+0.5
3,409,217	+		SMc04428	0.22	-0.5
3,409,217	+		SMc04428	0.22	+0.2
3,409,218	-		SMc04428	0.23	+0.1
3,409,257	-		SMc04428	0.32	-0.5
3,409,459	-				-0.1
3,409,573	-		SMc03293	0.50	+0.2
3,409,573	-		SMc03293	0.50	+0.9
3,409,589	+		SMc03293	0.55	+1.0
3,409,719	+				-0.3
3,409,719	+				-0.7
3,409,719	+				+0.2
3,409,728	+				+0.5
3,409,766	-				+0.0
3,409,766	-				-0.1
3,409,770	+				-0.5
3,409,771	-				-0.5
3,409,782	-				-0.7
3,409,810	+				+1.1
3,409,819	+				+0.1
3,409,819	+				+0.0
3,409,820	-				+0.2
3,409,846	+				+0.2
3,409,846	+				-0.5
3,409,847	-				-0.9
3,409,934	+				+0.9
3,409,935	-				-0.8
3,410,041	+				+0.3
3,410,042	-				-0.2
3,410,042	-				-0.9
3,410,125	-		SMc03294	0.15	-0.9
3,410,137	+		SMc03294	0.18	+0.1
3,410,137	+		SMc03294	0.18	-0.5
3,410,179	+		SMc03294	0.30	-0.4
3,410,179	+		SMc03294	0.30	-0.2
3,410,179	+		SMc03294	0.30	-1.6
3,410,179	+		SMc03294	0.30	+0.1
3,410,179	+		SMc03294	0.30	+0.0
3,410,179	+		SMc03294	0.30	+0.2
3,410,179	+		SMc03294	0.30	-0.2
3,410,180	-		SMc03294	0.31	+0.3
3,410,180	-		SMc03294	0.31	+0.2
3,410,180	-		SMc03294	0.31	+0.1
3,410,189	+		SMc03294	0.33	-1.3
3,410,190	-		SMc03294	0.34	+1.9
3,410,190	-		SMc03294	0.34	-0.1
3,410,250	+		SMc03294	0.51	+0.9
3,410,250	+		SMc03294	0.51	+1.0
3,410,250	+		SMc03294	0.51	+0.2
3,410,251	-		SMc03294	0.51	+0.2
3,410,297	-		SMc03294	0.65	-0.3
3,410,432	+				+0.3
3,410,432	+				+0.3
3,410,435	+				-0.6
3,410,435	+				-0.7
3,410,435	+				-0.7
3,410,435	+				+0.7
3,410,435	+				-0.7
3,410,436	-				-0.0
3,410,436	-				-0.1
3,410,436	-				+0.3
3,410,485	+				+1.1
3,410,486	-				-2.1
3,410,487	+				+0.4
3,410,487	+				+0.4
3,410,488	-				+0.9
3,410,488	-				+0.1
3,410,488	-				+1.0
3,410,592	-				-0.2
3,410,592	-				+1.0
3,410,596	-				+0.3