Strain Fitness in Sinorhizobium meliloti 1021 around SMc02687

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,536,434	+				-1.0
2,536,490	+				-0.1
2,536,490	+				-0.9
2,536,490	+				+0.0
2,536,490	+				-1.0
2,536,490	+				-0.7
2,536,490	+				+0.3
2,536,491	-				-0.2
2,536,491	-				+0.6
2,536,491	-				+0.1
2,536,491	-				+0.4
2,536,491	-				+0.5
2,536,492	+				+0.2
2,536,492	+				+0.5
2,536,492	+				+0.2
2,536,492	+				-0.7
2,536,492	+				-1.2
2,536,492	+				-1.3
2,536,492	+				-0.6
2,536,492	+				+0.4
2,536,492	+				-0.1
2,536,493	-				-0.0
2,536,493	-				+0.1
2,536,493	-				+0.4
2,536,493	-				+0.2
2,536,493	-				-0.4
2,536,493	-				-0.3
2,536,493	-				+3.3
2,536,493	-				-0.3
2,536,531	+				+0.0
2,536,532	-				+1.2
2,536,657	+		SMc02687	0.23	-1.3
2,536,658	-		SMc02687	0.23	-0.8
2,536,658	-		SMc02687	0.23	-0.3
2,536,658	-		SMc02687	0.23	-0.6
2,536,753	+		SMc02687	0.34	+0.1
2,537,097	+		SMc02687	0.75	-0.8
2,537,097	+		SMc02687	0.75	+0.0
2,537,543	+		SMc02688	0.45	-0.2
2,537,543	+		SMc02688	0.45	-0.0
2,537,543	+		SMc02688	0.45	-0.0
2,537,597	+		SMc02688	0.59	+0.2
2,537,597	+		SMc02688	0.59	-0.3
2,537,598	-		SMc02688	0.59	+0.1
2,537,598	-		SMc02688	0.59	-0.2
2,537,663	-		SMc02688	0.76	+0.2
2,537,663	-		SMc02688	0.76	+0.3
2,537,663	-		SMc02688	0.76	+0.1
2,537,663	-		SMc02688	0.76	-1.2
2,537,663	-		SMc02688	0.76	-0.3
2,537,663	-		SMc02688	0.76	-0.3
2,537,863	+				-0.1
2,537,874	+				+0.8
2,537,874	+				+0.1
2,537,875	-				-0.3
2,537,875	-				+0.4
2,538,023	+				+0.9
2,538,032	+				-0.4
2,538,032	+				-0.0
2,538,080	+		SMc02689	0.13	+0.7
2,538,125	+		SMc02689	0.16	-1.0
2,538,126	-		SMc02689	0.16	-1.5
2,538,241	+		SMc02689	0.23	+0.2
2,538,241	+		SMc02689	0.23	-0.1
2,538,241	+		SMc02689	0.23	-0.7
2,538,257	+		SMc02689	0.25	+0.0
2,538,257	+		SMc02689	0.25	-0.2
2,538,257	+		SMc02689	0.25	-0.6
2,538,257	+		SMc02689	0.25	+1.0
2,538,258	-		SMc02689	0.25	+0.5
2,538,258	-		SMc02689	0.25	-0.3
2,538,258	-		SMc02689	0.25	+0.2
2,538,258	-		SMc02689	0.25	+0.7
2,538,261	-		SMc02689	0.25	-0.3