Strain Fitness in Sinorhizobium meliloti 1021 around SMc02594

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
90,286	+		SMc02592	0.63	+0.4
90,287	-		SMc02592	0.63	+0.7
90,287	-		SMc02592	0.63	+0.8
90,424	+		SMc02592	0.87	-1.1
90,424	+		SMc02592	0.87	-1.3
90,424	+		SMc02592	0.87	+0.2
90,425	-		SMc02592	0.87	+0.2
90,486	-				-0.6
90,546	-				-0.7
90,738	+		SMc02593	0.38	+0.4
90,739	-		SMc02593	0.38	-0.5
90,739	-		SMc02593	0.38	-0.1
91,071	+				-0.9
91,147	+				+0.2
91,147	+				-0.1
91,298	-		SMc02594	0.11	+0.5
91,367	+		SMc02594	0.22	+1.0
91,367	+		SMc02594	0.22	+0.6
91,367	+		SMc02594	0.22	-0.2
91,367	+		SMc02594	0.22	+1.4
91,368	-		SMc02594	0.22	+0.9
91,370	+		SMc02594	0.22	+0.5
91,371	-		SMc02594	0.22	-0.3
91,371	-		SMc02594	0.22	+0.5
91,432	+		SMc02594	0.31	+0.1
91,471	+		SMc02594	0.37	-1.1
91,583	-		SMc02594	0.54	+0.4
91,675	+		SMc02594	0.68	-0.2
91,676	-		SMc02594	0.68	-0.1
91,723	+		SMc02594	0.75	-0.1
91,723	+		SMc02594	0.75	+0.1
91,724	-		SMc02594	0.75	+0.0
91,724	-		SMc02594	0.75	-0.7
91,872	+				-0.0
91,899	-				-0.3
91,956	-				-1.7
91,967	+				-0.9
91,967	+				-0.9
91,968	-				+0.7
92,120	+		SMc02595	0.16	-0.0
92,120	+		SMc02595	0.16	+0.5
92,120	+		SMc02595	0.16	-0.1
92,120	+		SMc02595	0.16	-0.0
92,242	+		SMc02595	0.26	-0.4
92,278	+		SMc02595	0.29	-0.3
92,278	+		SMc02595	0.29	+0.0
92,278	+		SMc02595	0.29	+0.3