Strain Fitness in Sinorhizobium meliloti 1021 around SMc01965

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,685,849	+		SMc01963	0.84	+0.6
2,685,953	+				+0.3
2,685,954	-				-0.0
2,685,954	-				+0.3
2,685,954	-				+0.0
2,685,954	-				+0.1
2,686,085	-		SMc01964	0.13	-0.9
2,686,085	-		SMc01964	0.13	+0.0
2,686,156	+		SMc01964	0.21	-0.3
2,686,156	+		SMc01964	0.21	-0.2
2,686,157	-		SMc01964	0.21	-0.5
2,686,330	+		SMc01964	0.42	-0.3
2,686,403	+		SMc01964	0.50	-0.1
2,686,403	+		SMc01964	0.50	+1.5
2,686,404	-		SMc01964	0.50	+0.1
2,686,452	+		SMc01964	0.56	-0.4
2,686,559	-		SMc01964	0.68	-2.2
2,686,663	+		SMc01964	0.80	-0.2
2,686,663	+		SMc01964	0.80	-1.6
2,686,664	-		SMc01964	0.81	+0.5
2,686,690	+		SMc01964	0.84	-0.8
2,686,690	+		SMc01964	0.84	+0.2
2,686,691	-		SMc01964	0.84	-0.1
2,687,258	-		SMc01965	0.42	-0.6
2,687,644	+		SMc01965	0.79	-0.4
2,687,645	-		SMc01965	0.79	-0.4
2,687,863	+				-0.8
2,687,863	+				-0.9
2,687,863	+				+2.2
2,687,863	+				+0.1
2,687,863	+				-0.4
2,687,863	+				+0.0
2,687,863	+				-0.1
2,687,863	+				+0.6
2,687,863	+				+0.1
2,687,863	+				-0.5
2,687,864	-				+0.4
2,687,864	-				-0.8
2,687,864	-				+0.4
2,687,864	-				+0.1
2,687,864	-				+0.2
2,687,864	-				-1.9
2,687,955	-				-0.6
2,687,955	-				-0.5
2,687,960	+				-0.0
2,687,976	+				-0.0
2,687,976	+				+0.4
2,688,103	-				-0.9
2,688,240	+		SMc01966	0.19	+0.2
2,688,240	+		SMc01966	0.19	+1.2
2,688,241	-		SMc01966	0.19	-0.4
2,688,241	-		SMc01966	0.19	+0.0
2,688,384	+		SMc01966	0.32	-1.2
2,688,384	+		SMc01966	0.32	-0.5
2,688,387	+		SMc01966	0.32	-0.2
2,688,654	+		SMc01966	0.57	-0.3
2,688,654	+		SMc01966	0.57	-1.0
2,688,655	-		SMc01966	0.57	-0.7
2,688,655	-		SMc01966	0.57	-0.6
2,688,655	-		SMc01966	0.57	-0.4