Strain Fitness in Sinorhizobium meliloti 1021 around SMc01469

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
2,314,874	+		SMc01467	0.57	+0.8
2,314,874	+		SMc01467	0.57	+0.3
2,314,875	-		SMc01467	0.57	-0.4
2,314,875	-		SMc01467	0.57	-0.4
2,314,875	-		SMc01467	0.57	+0.5
2,314,875	-		SMc01467	0.57	+0.6
2,314,877	+		SMc01467	0.58	-0.2
2,314,877	+		SMc01467	0.58	+0.7
2,314,878	-		SMc01467	0.58	+0.0
2,314,878	-		SMc01467	0.58	-0.1
2,314,878	-		SMc01467	0.58	+0.8
2,314,878	-		SMc01467	0.58	-0.1
2,314,878	-		SMc01467	0.58	-1.3
2,314,897	+		SMc01467	0.63	-0.5
2,314,929	+		SMc01467	0.71	-0.3
2,314,929	+		SMc01467	0.71	-0.5
2,314,930	-		SMc01467	0.72	+0.0
2,314,949	+		SMc01467	0.76	+0.1
2,314,952	+		SMc01467	0.77	-0.3
2,314,952	+		SMc01467	0.77	+0.7
2,314,952	+		SMc01467	0.77	-0.3
2,314,952	+		SMc01467	0.77	+2.0
2,314,952	+		SMc01467	0.77	-0.2
2,314,953	-		SMc01467	0.77	-2.6
2,315,089	+				-2.0
2,315,089	+				+0.2
2,315,089	+				-0.1
2,315,089	+				+0.7
2,315,090	-				+0.7
2,315,131	+				+1.1
2,315,346	+				+0.4
2,315,405	-				+0.1
2,315,722	+		SMc01468	0.69	+0.5
2,315,723	-		SMc01468	0.69	+0.6
2,316,193	+		SMc01469	0.16	-0.5
2,316,193	+		SMc01469	0.16	-0.4
2,316,193	+		SMc01469	0.16	+0.2
2,316,193	+		SMc01469	0.16	-2.0
2,316,325	+		SMc01469	0.22	+0.2
2,316,325	+		SMc01469	0.22	+0.1
2,316,326	-		SMc01469	0.22	-0.6
2,316,326	-		SMc01469	0.22	-0.6
2,316,443	-		SMc01469	0.28	-1.2
2,317,831	-				-1.0
2,317,895	+				-0.5
2,317,955	+				-0.0
2,318,038	+				-0.1
2,318,040	-				+0.4
2,318,041	+				-0.2
2,318,091	+				+0.1
2,318,091	+				+0.0
2,318,092	-				+2.1
2,318,178	+				+0.3
2,318,179	-				-0.1
2,318,422	+				-0.4
2,318,422	+				-0.7
2,318,422	+				+0.1
2,318,423	-				-0.7
2,318,791	-		SMc01471	0.49	+1.2
2,318,819	+		SMc01471	0.54	-0.1
2,318,842	-		SMc01471	0.58	+0.5
2,318,928	+		SMc01471	0.72	+1.7
2,318,928	+		SMc01471	0.72	+0.7
2,318,928	+		SMc01471	0.72	-1.9