Strain Fitness in Sinorhizobium meliloti 1021 around SMc01174

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,754,664	+		SMc01175	0.14	-0.8
1,754,664	+		SMc01175	0.14	+0.2
1,754,664	+		SMc01175	0.14	-0.7
1,754,684	+		SMc01175	0.17	-0.0
1,754,685	-		SMc01175	0.17	+0.1
1,754,688	+		SMc01175	0.17	-0.2
1,754,688	+		SMc01175	0.17	-0.7
1,754,812	-		SMc01175	0.32	-0.1
1,754,812	-		SMc01175	0.32	-0.2
1,754,916	-		SMc01175	0.44	+0.9
1,754,943	-		SMc01175	0.47	+0.6
1,754,994	+		SMc01175	0.53	+1.4
1,754,995	-		SMc01175	0.53	+0.1
1,754,995	-		SMc01175	0.53	-0.4
1,755,143	+		SMc01175	0.71	-0.2
1,755,244	+		SMc01175	0.83	-1.9
1,755,244	+		SMc01175	0.83	-0.6
1,755,244	+		SMc01175	0.83	-1.1
1,755,245	-		SMc01175	0.83	-0.3
1,755,245	-		SMc01175	0.83	-0.4
1,755,379	+				+0.6
1,755,380	-				+0.1
1,755,380	-				-0.2
1,755,380	-				+0.4
1,755,435	+				+0.3
1,755,436	-				-0.4
1,755,450	+				-0.2
1,755,450	+				-0.3
1,755,450	+				-0.5
1,755,450	+				-0.2
1,755,450	+				-0.8
1,755,450	+				+0.2
1,755,451	-				-0.9
1,755,451	-				-0.6
1,755,452	+				+0.2
1,755,452	+				-0.2
1,755,453	-				+1.5
1,755,453	-				-0.5
1,755,554	+				-1.3
1,755,555	-				+0.0
1,755,555	-				-0.6
1,755,567	+				+0.8
1,755,596	+				+0.1
1,755,654	+				-0.7
1,755,655	-				-1.1
1,755,666	-				-0.8
1,755,704	+				-0.8
1,755,705	-				-1.6
1,755,705	-				-0.3
1,755,705	-				-1.3
1,755,915	-		SMc01174	0.23	-1.3
1,755,967	-		SMc01174	0.28	-0.1
1,756,066	-		SMc01174	0.37	-0.1
1,756,083	+		SMc01174	0.39	-1.3
1,756,083	+		SMc01174	0.39	-0.3
1,756,083	+		SMc01174	0.39	+0.2
1,756,084	-		SMc01174	0.39	-2.5
1,756,084	-		SMc01174	0.39	-1.9
1,756,084	-		SMc01174	0.39	-1.3
1,756,084	-		SMc01174	0.39	-0.9
1,756,353	+		SMc01174	0.64	-2.7
1,756,353	+		SMc01174	0.64	-1.0
1,756,354	-		SMc01174	0.64	-0.9
1,756,494	+		SMc01174	0.77	-1.8
1,756,494	+		SMc01174	0.77	-1.9
1,756,494	+		SMc01174	0.77	-1.5
1,756,495	-		SMc01174	0.77	+0.2
1,756,524	-		SMc01174	0.80	-1.2
1,756,524	-		SMc01174	0.80	-1.3
1,756,623	+		SMc01174	0.89	-0.9
1,756,623	+		SMc01174	0.89	-1.6
1,756,624	-		SMc01174	0.89	-2.0
1,756,636	-		SMc01174	0.90	-0.6
1,756,717	+				+1.4
1,756,717	+				+1.0
1,756,718	-				-1.0
1,756,718	-				+0.3
1,756,728	+				-1.3
1,756,744	-				+0.2
1,756,744	-				+0.6
1,756,868	-		SMc01173	0.15	+0.0
1,757,054	-		SMc01173	0.40	-0.1
1,757,234	-		SMc01173	0.64	-0.7
1,757,464	-				+1.1
1,757,465	+				+1.2
1,757,596	-				-0.1
1,757,672	-				-0.5