Strain Fitness in Sinorhizobium meliloti 1021 around SMa5021

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
227,975	-		SMa5020	0.62	-0.1
228,094	+		SMa5020	0.75	+0.4
228,112	-		SMa5020	0.77	+0.5
228,121	+		SMa5020	0.78	-0.1
228,122	-		SMa5020	0.78	+0.1
228,122	-		SMa5020	0.78	+0.4
228,612	+		SMa0421	0.59	-0.1
228,699	+		SMa0421	0.76	-0.1
228,699	+		SMa0421	0.76	-0.1
228,700	-		SMa0421	0.76	+0.5
228,700	-		SMa0421	0.76	-0.2
228,789	+				+0.4
228,790	-				+0.1
228,848	+				+0.1
228,849	-				-0.2
228,849	-				-0.4
228,973	-		SMa5021	0.35	+0.1
228,991	-		SMa5021	0.39	+0.5
229,042	+		SMa5021	0.51	-0.3
229,042	+		SMa5021	0.51	+1.4
229,208	+		SMa5021	0.89	+0.3
229,210	+		SMa5021	0.89	+0.9
229,223	-				+0.6
229,357	+				+0.2
229,357	+				+0.1
229,469	+		SMa0424	0.17	-0.2
229,469	+		SMa0424	0.17	-0.8
229,470	-		SMa0424	0.17	-0.8
229,520	+		SMa0424	0.22	-0.4
229,524	-		SMa0424	0.22	-1.2
229,662	+		SMa0424	0.36	-0.3
229,882	+		SMa0424	0.57	-0.2