Strain Fitness in Sinorhizobium meliloti 1021 around SMa2097

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,182,034	-		SMa2095	0.39	-0.3
1,182,154	+		SMa2095	0.53	-0.1
1,182,155	-		SMa2095	0.53	-0.2
1,182,204	+		SMa2095	0.59	+0.0
1,182,428	-		SMa2095	0.84	+0.3
1,182,520	+				-0.8
1,182,520	+				+0.3
1,182,570	+				-0.1
1,182,571	-				+0.2
1,182,689	+		SMa2097	0.10	+0.0
1,182,690	-		SMa2097	0.10	+0.6
1,182,690	-		SMa2097	0.10	+0.1
1,182,690	-		SMa2097	0.10	-1.1
1,182,874	+		SMa2097	0.25	-0.4
1,182,874	+		SMa2097	0.25	-0.1
1,182,875	-		SMa2097	0.25	-0.1
1,182,875	-		SMa2097	0.25	-0.5
1,182,880	+		SMa2097	0.25	-1.7
1,182,881	-		SMa2097	0.25	+0.5
1,182,881	-		SMa2097	0.25	-0.4
1,182,881	-		SMa2097	0.25	-0.6
1,182,883	-		SMa2097	0.26	-0.3
1,183,340	+		SMa2097	0.62	-0.2
1,183,340	+		SMa2097	0.62	-0.3
1,183,340	+		SMa2097	0.62	-0.1
1,183,340	+		SMa2097	0.62	-1.0
1,183,341	-		SMa2097	0.62	-0.5
1,183,341	-		SMa2097	0.62	-0.8
1,183,361	+		SMa2097	0.64	-0.2
1,183,441	+		SMa2097	0.70	+0.1
1,183,441	+		SMa2097	0.70	+0.1
1,183,592	+		SMa2097	0.82	-0.3
1,183,592	+		SMa2097	0.82	+0.6
1,183,593	-		SMa2097	0.82	-0.1
1,183,703	+				-1.0
1,183,730	+				+0.2
1,183,759	+				-0.6
1,183,759	+				+0.3
1,183,759	+				+0.2
1,183,760	-				-0.7
1,183,760	-				+0.2
1,183,768	+				-0.2
1,183,769	-				+0.7
1,183,800	+				-0.1
1,183,801	-				+0.4
1,183,801	-				-0.5
1,183,811	+				-0.2
1,183,812	-				-1.8
1,183,812	-				-0.2
1,183,812	-				-0.6
1,183,812	-				-1.2
1,184,036	+		SMa2099	0.31	+0.6
1,184,036	+		SMa2099	0.31	+0.3
1,184,037	-				+2.0
1,184,037	-		SMa2099	0.31	+0.1
1,184,297	+		SMa2099	0.71	+0.6
1,184,297	+		SMa2099	0.71	-0.4
1,184,297	+		SMa2099	0.71	+0.1
1,184,298	-		SMa2099	0.72	+0.0
1,184,298	-		SMa2099	0.72	+0.2
1,184,298	-		SMa2099	0.72	+0.4
1,184,477	+				-0.2
1,184,565	-				-0.8
1,184,591	+				-0.5
1,184,591	+				+0.0
1,184,592	-				-1.0
1,184,607	-				+0.0
1,184,801	+		SMa2101	0.23	-0.2
1,184,802	-		SMa2101	0.23	-0.7