Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21455

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,381,178	+		SM_b21452	0.28	+0.2
1,381,178	+		SM_b21452	0.28	-0.2
1,381,179	-		SM_b21452	0.28	+0.5
1,381,179	-		SM_b21452	0.28	-0.3
1,381,737	+				-0.2
1,381,738	-				+0.0
1,381,738	-				-0.5
1,381,738	-				-0.9
1,381,811	+				-1.5
1,381,812	-				+0.7
1,382,075	-		SM_b21454	0.80	+0.1
1,382,177	-				-0.6
1,382,185	-				-0.5
1,382,203	-				-0.4
1,382,203	-				-0.1
1,382,278	+		SM_b21455	0.10	-1.2
1,382,279	-		SM_b21455	0.10	-2.4
1,382,355	-		SM_b21455	0.16	-1.1
1,383,056	+		SM_b21455	0.67	-0.1
1,383,374	+				+0.1
1,383,374	+				-0.4
1,383,374	+				-0.6
1,383,374	+				-0.2
1,383,375	-				-0.9
1,383,375	-				+0.2
1,383,375	-				+0.7
1,383,375	-				+0.5
1,383,375	-				+1.1
1,383,554	+				-0.4
1,383,554	+				-0.3
1,383,554	+				-0.5
1,383,560	-				-0.2
1,383,645	-				+0.1
1,383,645	-				-0.2
1,383,842	+		SM_b21456	0.12	+0.6
1,383,906	+		SM_b21456	0.26	-0.6
1,383,907	-		SM_b21456	0.26	-0.3
1,383,919	+		SM_b21456	0.29	+0.0
1,383,920	-		SM_b21456	0.29	+0.1
1,383,920	-		SM_b21456	0.29	-0.9
1,383,920	-		SM_b21456	0.29	-0.3
1,383,920	-		SM_b21456	0.29	-1.0
1,383,920	-				+1.2
1,383,923	+		SM_b21456	0.30	-0.5
1,383,923	+		SM_b21456	0.30	+0.1
1,383,924	-		SM_b21456	0.30	-0.0
1,383,924	-		SM_b21456	0.30	-0.2
1,383,966	+		SM_b21456	0.40	-0.4
1,383,966	+		SM_b21456	0.40	+0.3
1,383,966	+		SM_b21456	0.40	-0.8
1,384,071	+		SM_b21456	0.64	-1.5
1,384,071	+		SM_b21456	0.64	+1.2
1,384,072	-		SM_b21456	0.64	-0.9
1,384,072	-		SM_b21456	0.64	+0.1
1,384,203	-				-0.1
1,384,239	+				+0.1
1,384,250	+				+0.1
1,384,250	+				-1.3
1,384,276	+				-1.5
1,384,326	+				+1.5
1,384,327	-				+0.2