Strain Fitness in Sinorhizobium meliloti 1021 around SM_b21443

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
1,371,040	-				+0.6
1,371,040	-				+0.3
1,371,041	+				+0.5
1,371,305	+		SM_b21441	0.59	-0.5
1,371,306	-		SM_b21441	0.59	+0.7
1,371,306	-		SM_b21441	0.59	+0.3
1,371,477	+				-0.3
1,371,847	-		SM_b21442	0.78	+0.2
1,371,893	+		SM_b21442	0.88	-0.3
1,371,894	-		SM_b21442	0.88	-0.5
1,371,911	+				-1.9
1,371,982	-				+1.3
1,372,002	+				+0.2
1,372,002	+				+0.4
1,372,002	+				-0.5
1,372,002	+				+0.8
1,372,003	-				-0.7
1,372,003	-				-1.7
1,372,003	-				+1.6
1,372,003	-				-0.2
1,372,003	-				-0.1
1,372,003	-				-1.5
1,372,003	-				+0.4
1,372,003	-				+0.6
1,372,134	+		SM_b21443	0.43	+1.5
1,372,134	+		SM_b21443	0.43	+0.2
1,372,135	-		SM_b21443	0.43	+0.0
1,372,358	+				+0.5
1,372,358	+				+0.1
1,372,359	-				-1.2
1,372,424	+		SM_b21444	0.12	-0.4
1,372,430	+		SM_b21444	0.13	-0.3
1,372,430	+		SM_b21444	0.13	+1.1
1,372,431	-		SM_b21444	0.13	-0.3
1,372,533	-		SM_b21444	0.27	+0.0
1,372,578	-		SM_b21444	0.33	+0.3
1,372,613	+		SM_b21444	0.38	+0.1
1,372,613	+		SM_b21444	0.38	+1.0
1,372,613	+				-0.7
1,372,629	-		SM_b21444	0.40	+0.1
1,372,914	+		SM_b21444	0.78	+0.2
1,373,016	+				-0.3
1,373,016	+				+0.2
1,373,017	-				+0.1
1,373,017	-				-0.5
1,373,038	+				+0.4
1,373,038	+				-0.1
1,373,038	+				+0.2
1,373,039	-				+0.8
1,373,039	-				-0.5
1,373,068	+				-0.8
1,373,110	+				-0.4
1,373,110	+				+0.3
1,373,186	+				+2.1
1,373,186	+				-2.4
1,373,187	-				+0.1
1,373,190	+				-0.2
1,373,190	+				-0.7
1,373,190	+				-0.2
1,373,191	-				-0.1
1,373,191	-				-1.1
1,373,253	-				-0.0