Strain Fitness in Sinorhizobium meliloti 1021 around SM_b20130

Experiment: Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C)
141,838	+				+1.2
141,995	+		SM_b20129	0.24	+0.7
141,995	+		SM_b20129	0.24	-0.4
142,097	+		SM_b20129	0.37	+0.6
142,097	+		SM_b20129	0.37	+0.6
142,098	-		SM_b20129	0.38	-0.2
142,210	+		SM_b20129	0.52	+0.4
142,211	-		SM_b20129	0.52	+0.3
142,447	-		SM_b20129	0.82	-0.2
142,651	-				-0.3
142,651	-				-0.2
142,653	+				+1.0
142,653	+				-0.2
142,653	+				+0.0
142,818	-		SM_b20130	0.21	+0.2
142,821	+		SM_b20130	0.22	-1.1
142,821	+		SM_b20130	0.22	-0.0
142,821	+		SM_b20130	0.22	-0.3
142,942	+		SM_b20130	0.36	+0.1
142,943	-		SM_b20130	0.36	-0.5
143,046	+		SM_b20130	0.48	-1.1
143,140	+		SM_b20130	0.58	-0.1
143,578	-		SM_b20131	0.17	-0.4
143,897	-		SM_b20131	0.83	-0.1
143,916	-		SM_b20131	0.87	+0.5
143,916	-		SM_b20131	0.87	+2.7
143,916	-		SM_b20131	0.87	+0.3
143,916	-		SM_b20131	0.87	-0.7
143,977	-				+0.2
143,986	+				-0.7
143,986	+				+0.1
143,986	+				+1.0
143,986	+				-0.2
143,987	-				-0.9
143,987	-				-0.3
144,088	+				+0.3
144,088	+				+0.4
144,088	+				-1.0
144,292	+		SM_b20132	0.14	-0.3
144,292	+		SM_b20132	0.14	+1.9
144,293	-		SM_b20132	0.14	+0.3
144,293	-		SM_b20132	0.14	-0.3
144,317	-		SM_b20132	0.15	-0.2
144,398	-		SM_b20132	0.18	+1.1