Experiment: L-Lysine 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1248 and Psest_1249 overlap by 1 nucleotides Psest_1249 and Psest_1250 are separated by 159 nucleotides Psest_1250 and Psest_1251 are separated by 31 nucleotides
Psest_1248: Psest_1248 - RNA methyltransferase, TrmH family, group 1, at 1,356,086 to 1,356,862
_1248
Psest_1249: Psest_1249 - serine O-acetyltransferase, at 1,356,862 to 1,357,638
_1249
Psest_1250: Psest_1250 - iron-sulfur cluster assembly transcription factor IscR, at 1,357,798 to 1,358,289
_1250
Psest_1251: Psest_1251 - cysteine desulfurase IscS, at 1,358,321 to 1,359,535
_1251
Position (kb)
1357
1358
1359 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.160 kb on + strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.161 kb on - strand, within Psest_1249 at 1357.162 kb on + strand, within Psest_1249 at 1357.163 kb on - strand, within Psest_1249 at 1357.232 kb on + strand, within Psest_1249 at 1357.450 kb on - strand, within Psest_1249 at 1357.450 kb on - strand, within Psest_1249 at 1357.525 kb on - strand, within Psest_1249 at 1357.525 kb on - strand, within Psest_1249 at 1357.663 kb on + strand at 1357.853 kb on + strand, within Psest_1250 at 1357.853 kb on + strand, within Psest_1250 at 1358.267 kb on + strand at 1358.267 kb on + strand at 1358.267 kb on + strand at 1358.267 kb on + strand at 1358.267 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lysine 200 mM remove 1,357,160 + Psest_1249 0.38 -0.2 1,357,160 + Psest_1249 0.38 +0.4 1,357,160 + Psest_1249 0.38 +3.3 1,357,160 + Psest_1249 0.38 +1.5 1,357,160 + Psest_1249 0.38 +2.5 1,357,160 + Psest_1249 0.38 +1.9 1,357,160 + Psest_1249 0.38 -0.2 1,357,160 + Psest_1249 0.38 +1.8 1,357,161 - Psest_1249 0.38 +1.7 1,357,161 - Psest_1249 0.38 +2.8 1,357,161 - Psest_1249 0.38 +3.9 1,357,161 - Psest_1249 0.38 +2.8 1,357,161 - Psest_1249 0.38 +3.2 1,357,161 - Psest_1249 0.38 +2.0 1,357,161 - Psest_1249 0.38 +0.4 1,357,161 - Psest_1249 0.38 +1.8 1,357,161 - Psest_1249 0.38 +0.7 1,357,161 - Psest_1249 0.38 +1.4 1,357,161 - Psest_1249 0.38 +2.2 1,357,161 - Psest_1249 0.38 +2.5 1,357,161 - Psest_1249 0.38 +1.4 1,357,161 - Psest_1249 0.38 +2.8 1,357,162 + Psest_1249 0.39 +2.2 1,357,163 - Psest_1249 0.39 +2.3 1,357,232 + Psest_1249 0.48 +2.6 1,357,450 - Psest_1249 0.76 +3.2 1,357,450 - Psest_1249 0.76 +0.1 1,357,525 - Psest_1249 0.85 +1.6 1,357,525 - Psest_1249 0.85 +0.7 1,357,663 + -0.0 1,357,853 + Psest_1250 0.11 -1.5 1,357,853 + Psest_1250 0.11 +0.8 1,358,267 + -0.6 1,358,267 + +2.2 1,358,267 + +1.5 1,358,267 + +0.7 1,358,267 + +1.8
Or see this region's nucleotide sequence