Experiment: methyl-beta-D-xylopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21098 and SM_b21099 are separated by 170 nucleotides SM_b21099 and SM_b21100 are separated by 10 nucleotides
SM_b21098: SM_b21098 - hypothetical protein, at 740,599 to 741,396
_b21098
SM_b21099: SM_b21099 - hypothetical protein, at 741,567 to 741,989
_b21099
SM_b21100: SM_b21100 - polysaccharide deacetylase, at 742,000 to 742,878
_b21100
Position (kb) 741
742 Strain fitness (log2 ratio) -1
0
1
2 at 740.641 kb on + strand at 741.038 kb on - strand, within SM_b21098 at 741.364 kb on + strand at 741.365 kb on - strand at 741.417 kb on + strand at 741.417 kb on + strand at 741.417 kb on + strand at 741.418 kb on - strand at 741.642 kb on + strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.643 kb on - strand, within SM_b21099 at 741.706 kb on + strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 741.714 kb on - strand, within SM_b21099 at 742.006 kb on + strand at 742.006 kb on + strand at 742.007 kb on - strand at 742.007 kb on - strand at 742.178 kb on - strand, within SM_b21100 at 742.291 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.478 kb on - strand, within SM_b21100 at 742.887 kb on - strand at 742.915 kb on + strand at 742.945 kb on + strand at 742.946 kb on - strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.976 kb on + strand at 742.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction methyl-beta-D-xylopyranoside (C) remove 740,641 + -0.0 741,038 - SM_b21098 0.55 +1.1 741,364 + +0.3 741,365 - -0.8 741,417 + -0.2 741,417 + +0.6 741,417 + +0.7 741,418 - -1.2 741,642 + SM_b21099 0.18 -0.6 741,643 - SM_b21099 0.18 +0.8 741,643 - SM_b21099 0.18 +1.4 741,643 - SM_b21099 0.18 +0.2 741,706 + SM_b21099 0.33 +0.1 741,714 - SM_b21099 0.35 -0.0 741,714 - SM_b21099 0.35 +2.1 741,714 - SM_b21099 0.35 +1.1 742,006 + +0.0 742,006 + +2.3 742,007 - -0.8 742,007 - -0.0 742,178 - SM_b21100 0.20 -0.3 742,291 - SM_b21100 0.33 +0.9 742,478 - SM_b21100 0.54 +0.0 742,478 - SM_b21100 0.54 -1.1 742,887 - -0.2 742,915 + +0.5 742,945 + +0.3 742,946 - +0.3 742,976 + -0.4 742,976 + +0.2 742,976 + +0.3 742,977 - -0.3
Or see this region's nucleotide sequence