Experiment: Methyl beta-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0280 and SMa0281 are separated by 54 nucleotides SMa0281 and SMa0285 are separated by 360 nucleotides SMa0285 and SMa0286 are separated by 200 nucleotides SMa0286 and SMa0287 are separated by 10 nucleotides
SMa0280: SMa0280 - hypothetical protein, at 157,557 to 158,345
SMa0280
SMa0281: SMa0281 - MerR family transcriptional regulator, at 158,400 to 158,804
SMa0281
SMa0285: SMa0285 - hypothetical protein, at 159,165 to 159,389
SMa0285
SMa0286: SMa0286 - hypothetical protein, at 159,590 to 160,051
SMa0286
SMa0287: SMa0287 - hypothetical protein, at 160,062 to 160,508
SMa0287
Position (kb) 159
160 Strain fitness (log2 ratio) -1
0
1 at 158.286 kb on + strand at 158.563 kb on + strand, within SMa0281 at 158.573 kb on - strand, within SMa0281 at 158.712 kb on - strand, within SMa0281 at 158.735 kb on + strand, within SMa0281 at 158.735 kb on + strand, within SMa0281 at 158.846 kb on - strand at 158.926 kb on + strand at 158.927 kb on - strand at 158.927 kb on - strand at 158.927 kb on - strand at 158.975 kb on - strand at 158.975 kb on - strand at 159.012 kb on - strand at 159.072 kb on - strand at 159.135 kb on + strand at 159.135 kb on + strand at 159.136 kb on - strand at 159.136 kb on - strand at 159.136 kb on - strand at 159.416 kb on + strand at 159.416 kb on + strand at 159.416 kb on + strand at 159.417 kb on - strand at 159.417 kb on - strand at 159.515 kb on + strand at 159.515 kb on + strand at 159.516 kb on - strand at 159.528 kb on + strand at 159.529 kb on - strand at 159.529 kb on - strand at 159.591 kb on + strand at 159.591 kb on + strand at 159.592 kb on - strand at 159.609 kb on + strand at 159.610 kb on - strand at 159.721 kb on + strand, within SMa0286 at 159.880 kb on + strand, within SMa0286 at 160.076 kb on - strand at 160.160 kb on + strand, within SMa0287 at 160.162 kb on + strand, within SMa0287 at 160.162 kb on + strand, within SMa0287 at 160.163 kb on - strand, within SMa0287 at 160.163 kb on - strand, within SMa0287 at 160.279 kb on + strand, within SMa0287 at 160.347 kb on + strand, within SMa0287 at 160.348 kb on - strand, within SMa0287 at 160.366 kb on + strand, within SMa0287
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl beta-D-glucopyranoside (C) remove 158,286 + +0.1 158,563 + SMa0281 0.40 -1.4 158,573 - SMa0281 0.43 +0.6 158,712 - SMa0281 0.77 -0.5 158,735 + SMa0281 0.83 -1.2 158,735 + SMa0281 0.83 -0.9 158,846 - -0.5 158,926 + -0.8 158,927 - -0.7 158,927 - -0.0 158,927 - +0.3 158,975 - +0.3 158,975 - +0.8 159,012 - +0.3 159,072 - +0.9 159,135 + -0.3 159,135 + +0.3 159,136 - -1.3 159,136 - -0.3 159,136 - +0.2 159,416 + -0.1 159,416 + -0.1 159,416 + +0.7 159,417 - +0.1 159,417 - -0.1 159,515 + -0.5 159,515 + -0.2 159,516 - +0.3 159,528 + +0.4 159,529 - -0.2 159,529 - +0.7 159,591 + -0.5 159,591 + -0.2 159,592 - -0.4 159,609 + +0.1 159,610 - +0.1 159,721 + SMa0286 0.28 +0.8 159,880 + SMa0286 0.63 +0.5 160,076 - -0.6 160,160 + SMa0287 0.22 +0.0 160,162 + SMa0287 0.22 -1.2 160,162 + SMa0287 0.22 -0.1 160,163 - SMa0287 0.23 -1.5 160,163 - SMa0287 0.23 +0.0 160,279 + SMa0287 0.49 +0.2 160,347 + SMa0287 0.64 -0.4 160,348 - SMa0287 0.64 -0.4 160,366 + SMa0287 0.68 -0.7
Or see this region's nucleotide sequence