Experiment: Choline chloride 90 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0676 and Psest_0677 are separated by 21 nucleotides Psest_0677 and Psest_0678 are separated by 74 nucleotides
Psest_0676: Psest_0676 - ATP-dependent metalloprotease FtsH, at 737,328 to 739,175
_0676
Psest_0677: Psest_0677 - iron-sulfur cluster binding protein, putative, at 739,197 to 740,270
_0677
Psest_0678: Psest_0678 - yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region, at 740,345 to 741,835
_0678
Position (kb) 739
740
741 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 738.629 kb on - strand, within Psest_0676 at 738.786 kb on + strand, within Psest_0676 at 738.786 kb on + strand, within Psest_0676 at 738.786 kb on + strand, within Psest_0676 at 738.786 kb on + strand, within Psest_0676 at 738.786 kb on + strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.787 kb on - strand, within Psest_0676 at 738.788 kb on + strand, within Psest_0676 at 738.788 kb on + strand, within Psest_0676 at 738.788 kb on + strand, within Psest_0676 at 738.789 kb on - strand, within Psest_0676 at 738.789 kb on - strand, within Psest_0676 at 738.789 kb on - strand, within Psest_0676 at 738.789 kb on - strand, within Psest_0676 at 738.960 kb on + strand, within Psest_0676 at 738.960 kb on + strand, within Psest_0676 at 738.961 kb on - strand, within Psest_0676 at 739.040 kb on - strand at 739.537 kb on - strand, within Psest_0677 at 739.600 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.969 kb on + strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 739.970 kb on - strand, within Psest_0677 at 740.023 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.107 kb on + strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.108 kb on - strand, within Psest_0677 at 740.303 kb on + strand at 740.303 kb on + strand at 740.304 kb on - strand at 740.304 kb on - strand at 740.304 kb on - strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.305 kb on + strand at 740.372 kb on + strand at 740.372 kb on + strand at 740.372 kb on + strand at 740.374 kb on + strand at 740.374 kb on + strand at 740.374 kb on + strand at 740.762 kb on + strand, within Psest_0678 at 741.251 kb on + strand, within Psest_0678
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 90 mM remove 738,629 - Psest_0676 0.70 -0.5 738,786 + Psest_0676 0.79 -2.0 738,786 + Psest_0676 0.79 +1.2 738,786 + Psest_0676 0.79 +0.1 738,786 + Psest_0676 0.79 +0.8 738,786 + Psest_0676 0.79 +0.7 738,787 - Psest_0676 0.79 -0.5 738,787 - Psest_0676 0.79 -0.0 738,787 - Psest_0676 0.79 -0.2 738,787 - Psest_0676 0.79 +1.6 738,787 - Psest_0676 0.79 +0.1 738,787 - Psest_0676 0.79 -0.5 738,787 - Psest_0676 0.79 +0.8 738,788 + Psest_0676 0.79 +2.4 738,788 + Psest_0676 0.79 +0.0 738,788 + Psest_0676 0.79 -1.2 738,789 - Psest_0676 0.79 -0.6 738,789 - Psest_0676 0.79 -0.4 738,789 - Psest_0676 0.79 -1.4 738,789 - Psest_0676 0.79 +0.3 738,960 + Psest_0676 0.88 -0.5 738,960 + Psest_0676 0.88 +1.2 738,961 - Psest_0676 0.88 -2.1 739,040 - +0.9 739,537 - Psest_0677 0.32 +0.6 739,600 + Psest_0677 0.38 -0.4 739,969 + Psest_0677 0.72 +0.3 739,969 + Psest_0677 0.72 -1.6 739,969 + Psest_0677 0.72 -0.7 739,969 + Psest_0677 0.72 -0.5 739,970 - Psest_0677 0.72 -2.1 739,970 - Psest_0677 0.72 -0.6 739,970 - Psest_0677 0.72 -1.7 739,970 - Psest_0677 0.72 -2.2 739,970 - Psest_0677 0.72 -1.6 739,970 - Psest_0677 0.72 +0.9 739,970 - Psest_0677 0.72 +1.9 740,023 + Psest_0677 0.77 -2.9 740,107 + Psest_0677 0.85 -1.3 740,107 + Psest_0677 0.85 -2.5 740,107 + Psest_0677 0.85 +0.4 740,107 + Psest_0677 0.85 +0.6 740,107 + Psest_0677 0.85 +0.4 740,107 + Psest_0677 0.85 +0.1 740,107 + Psest_0677 0.85 -0.7 740,108 - Psest_0677 0.85 -1.8 740,108 - Psest_0677 0.85 +0.1 740,108 - Psest_0677 0.85 -0.1 740,303 + +0.2 740,303 + +0.2 740,304 - -1.3 740,304 - -0.5 740,304 - -2.0 740,305 + +0.3 740,305 + -1.8 740,305 + +2.9 740,305 + +1.3 740,305 + -1.1 740,305 + -1.4 740,372 + -0.6 740,372 + +0.4 740,372 + +0.2 740,374 + +0.2 740,374 + -2.7 740,374 + +0.5 740,762 + Psest_0678 0.28 -0.7 741,251 + Psest_0678 0.61 -1.5
Or see this region's nucleotide sequence