Experiment: Choline chloride 90 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0458 and Psest_0459 are separated by 12 nucleotides Psest_0459 and Psest_0460 overlap by 14 nucleotides
Psest_0458: Psest_0458 - Mn2+-dependent serine/threonine protein kinase, at 503,620 to 505,065
_0458
Psest_0459: Psest_0459 - Predicted carbamoyl transferase, NodU family, at 505,078 to 506,832
_0459
Psest_0460: Psest_0460 - Glycosyltransferase, at 506,819 to 507,952
_0460
Position (kb) 505
506
507 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 505.063 kb on + strand at 505.327 kb on + strand, within Psest_0459 at 505.624 kb on + strand, within Psest_0459 at 505.624 kb on + strand, within Psest_0459 at 505.624 kb on + strand, within Psest_0459 at 505.624 kb on + strand, within Psest_0459 at 505.624 kb on + strand, within Psest_0459 at 505.669 kb on + strand, within Psest_0459 at 505.825 kb on + strand, within Psest_0459 at 505.825 kb on + strand, within Psest_0459 at 505.846 kb on + strand, within Psest_0459 at 505.849 kb on + strand, within Psest_0459 at 505.849 kb on + strand, within Psest_0459 at 505.849 kb on + strand, within Psest_0459 at 505.849 kb on + strand, within Psest_0459 at 505.849 kb on + strand, within Psest_0459 at 505.915 kb on + strand, within Psest_0459 at 505.915 kb on + strand, within Psest_0459 at 505.915 kb on + strand, within Psest_0459 at 505.915 kb on + strand, within Psest_0459 at 505.915 kb on + strand, within Psest_0459 at 505.924 kb on + strand, within Psest_0459 at 505.978 kb on + strand, within Psest_0459 at 505.978 kb on + strand, within Psest_0459 at 505.981 kb on + strand, within Psest_0459 at 505.981 kb on + strand, within Psest_0459 at 505.981 kb on + strand, within Psest_0459 at 505.981 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.143 kb on + strand, within Psest_0459 at 506.147 kb on + strand, within Psest_0459 at 506.147 kb on + strand, within Psest_0459 at 506.147 kb on + strand, within Psest_0459 at 506.147 kb on + strand, within Psest_0459 at 506.191 kb on + strand, within Psest_0459 at 506.191 kb on + strand, within Psest_0459 at 506.191 kb on + strand, within Psest_0459 at 506.206 kb on + strand, within Psest_0459 at 506.238 kb on + strand, within Psest_0459 at 506.277 kb on + strand, within Psest_0459 at 506.277 kb on + strand, within Psest_0459 at 506.277 kb on + strand, within Psest_0459 at 506.770 kb on + strand at 506.818 kb on + strand at 506.818 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 90 mM remove 505,063 + -0.6 505,327 + Psest_0459 0.14 -1.8 505,624 + Psest_0459 0.31 -1.7 505,624 + Psest_0459 0.31 -0.9 505,624 + Psest_0459 0.31 -1.5 505,624 + Psest_0459 0.31 -3.2 505,624 + Psest_0459 0.31 -3.4 505,669 + Psest_0459 0.34 -3.1 505,825 + Psest_0459 0.43 -3.3 505,825 + Psest_0459 0.43 -3.4 505,846 + Psest_0459 0.44 -2.1 505,849 + Psest_0459 0.44 -1.3 505,849 + Psest_0459 0.44 -1.9 505,849 + Psest_0459 0.44 +0.0 505,849 + Psest_0459 0.44 -2.1 505,849 + Psest_0459 0.44 -2.0 505,915 + Psest_0459 0.48 +0.7 505,915 + Psest_0459 0.48 -0.9 505,915 + Psest_0459 0.48 -1.1 505,915 + Psest_0459 0.48 -1.3 505,915 + Psest_0459 0.48 -0.1 505,924 + Psest_0459 0.48 -1.3 505,978 + Psest_0459 0.51 -0.6 505,978 + Psest_0459 0.51 -2.4 505,981 + Psest_0459 0.51 -0.5 505,981 + Psest_0459 0.51 -1.5 505,981 + Psest_0459 0.51 -1.3 505,981 + Psest_0459 0.51 -0.3 506,143 + Psest_0459 0.61 -1.5 506,143 + Psest_0459 0.61 -1.1 506,143 + Psest_0459 0.61 +0.2 506,143 + Psest_0459 0.61 +0.2 506,143 + Psest_0459 0.61 -1.3 506,143 + Psest_0459 0.61 -1.6 506,143 + Psest_0459 0.61 -0.9 506,143 + Psest_0459 0.61 -0.6 506,143 + Psest_0459 0.61 -1.6 506,143 + Psest_0459 0.61 -0.8 506,143 + Psest_0459 0.61 -1.9 506,143 + Psest_0459 0.61 -1.1 506,143 + Psest_0459 0.61 -1.0 506,143 + Psest_0459 0.61 -1.7 506,143 + Psest_0459 0.61 -1.0 506,143 + Psest_0459 0.61 -0.3 506,147 + Psest_0459 0.61 -2.0 506,147 + Psest_0459 0.61 -0.1 506,147 + Psest_0459 0.61 -1.3 506,147 + Psest_0459 0.61 +1.0 506,191 + Psest_0459 0.63 +0.5 506,191 + Psest_0459 0.63 -1.0 506,191 + Psest_0459 0.63 -1.3 506,206 + Psest_0459 0.64 -0.3 506,238 + Psest_0459 0.66 -2.3 506,277 + Psest_0459 0.68 -2.4 506,277 + Psest_0459 0.68 -0.5 506,277 + Psest_0459 0.68 -1.6 506,770 + -1.6 506,818 + -1.1 506,818 + -0.2
Or see this region's nucleotide sequence