Experiment: Choline chloride 90 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2461 and Psest_2462 overlap by 1 nucleotides Psest_2462 and Psest_2463 are separated by 170 nucleotides
Psest_2461: Psest_2461 - tRNA 2-selenouridine synthase, at 2,631,787 to 2,632,893
_2461
Psest_2462: Psest_2462 - selenium donor protein, at 2,632,893 to 2,633,927
_2462
Psest_2463: Psest_2463 - Predicted esterase of the alpha-beta hydrolase superfamily, at 2,634,098 to 2,635,087
_2463
Position (kb)
2632
2633
2634 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2631.902 kb on + strand, within Psest_2461 at 2631.989 kb on - strand, within Psest_2461 at 2632.128 kb on - strand, within Psest_2461 at 2632.408 kb on + strand, within Psest_2461 at 2632.409 kb on - strand, within Psest_2461 at 2632.524 kb on - strand, within Psest_2461 at 2632.613 kb on + strand, within Psest_2461 at 2632.613 kb on + strand, within Psest_2461 at 2632.614 kb on - strand, within Psest_2461 at 2632.619 kb on + strand, within Psest_2461 at 2632.619 kb on + strand, within Psest_2461 at 2632.620 kb on - strand, within Psest_2461 at 2632.620 kb on - strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.736 kb on + strand, within Psest_2461 at 2632.737 kb on - strand, within Psest_2461 at 2632.737 kb on - strand, within Psest_2461 at 2633.089 kb on + strand, within Psest_2462 at 2633.089 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.140 kb on + strand, within Psest_2462 at 2633.176 kb on + strand, within Psest_2462 at 2633.407 kb on + strand, within Psest_2462 at 2633.407 kb on + strand, within Psest_2462 at 2633.408 kb on - strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.653 kb on + strand, within Psest_2462 at 2633.654 kb on - strand, within Psest_2462 at 2633.654 kb on - strand, within Psest_2462 at 2633.654 kb on - strand, within Psest_2462 at 2633.654 kb on - strand, within Psest_2462 at 2633.654 kb on - strand, within Psest_2462 at 2633.767 kb on + strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.768 kb on - strand, within Psest_2462 at 2633.769 kb on + strand, within Psest_2462 at 2633.769 kb on + strand, within Psest_2462 at 2633.769 kb on + strand, within Psest_2462 at 2633.770 kb on - strand, within Psest_2462 at 2633.770 kb on - strand, within Psest_2462 at 2633.770 kb on - strand, within Psest_2462 at 2633.899 kb on + strand at 2633.899 kb on + strand at 2633.900 kb on - strand at 2633.969 kb on - strand at 2633.969 kb on - strand at 2634.104 kb on - strand at 2634.120 kb on + strand at 2634.146 kb on + strand at 2634.293 kb on + strand, within Psest_2463 at 2634.646 kb on + strand, within Psest_2463 at 2634.647 kb on - strand, within Psest_2463 at 2634.647 kb on - strand, within Psest_2463 at 2634.647 kb on - strand, within Psest_2463
Per-strain Table
Position Strand Gene LocusTag Fraction Choline chloride 90 mM remove 2,631,902 + Psest_2461 0.10 -0.3 2,631,989 - Psest_2461 0.18 +1.7 2,632,128 - Psest_2461 0.31 -0.6 2,632,408 + Psest_2461 0.56 +1.3 2,632,409 - Psest_2461 0.56 +0.9 2,632,524 - Psest_2461 0.67 -0.7 2,632,613 + Psest_2461 0.75 +0.8 2,632,613 + Psest_2461 0.75 -2.0 2,632,614 - Psest_2461 0.75 -1.2 2,632,619 + Psest_2461 0.75 +1.1 2,632,619 + Psest_2461 0.75 -0.2 2,632,620 - Psest_2461 0.75 +0.0 2,632,620 - Psest_2461 0.75 +0.1 2,632,736 + Psest_2461 0.86 -1.6 2,632,736 + Psest_2461 0.86 +1.8 2,632,736 + Psest_2461 0.86 -0.8 2,632,736 + Psest_2461 0.86 -3.0 2,632,737 - Psest_2461 0.86 +2.0 2,632,737 - Psest_2461 0.86 +0.1 2,633,089 + Psest_2462 0.19 -0.7 2,633,089 + Psest_2462 0.19 -2.5 2,633,140 + Psest_2462 0.24 +0.1 2,633,140 + Psest_2462 0.24 +2.4 2,633,140 + Psest_2462 0.24 -0.9 2,633,140 + Psest_2462 0.24 -0.9 2,633,140 + Psest_2462 0.24 -2.0 2,633,140 + Psest_2462 0.24 -2.7 2,633,176 + Psest_2462 0.27 -0.5 2,633,407 + Psest_2462 0.50 -0.1 2,633,407 + Psest_2462 0.50 +1.3 2,633,408 - Psest_2462 0.50 +1.0 2,633,653 + Psest_2462 0.73 -2.6 2,633,653 + Psest_2462 0.73 -1.2 2,633,653 + Psest_2462 0.73 +0.7 2,633,653 + Psest_2462 0.73 -0.3 2,633,653 + Psest_2462 0.73 +0.4 2,633,653 + Psest_2462 0.73 +0.1 2,633,653 + Psest_2462 0.73 -1.0 2,633,653 + Psest_2462 0.73 -1.8 2,633,653 + Psest_2462 0.73 -0.5 2,633,654 - Psest_2462 0.74 +0.4 2,633,654 - Psest_2462 0.74 +0.6 2,633,654 - Psest_2462 0.74 -0.9 2,633,654 - Psest_2462 0.74 -1.3 2,633,654 - Psest_2462 0.74 -1.4 2,633,767 + Psest_2462 0.84 +4.5 2,633,768 - Psest_2462 0.85 +0.4 2,633,768 - Psest_2462 0.85 -0.6 2,633,768 - Psest_2462 0.85 -0.0 2,633,768 - Psest_2462 0.85 -1.1 2,633,768 - Psest_2462 0.85 +0.7 2,633,768 - Psest_2462 0.85 -2.0 2,633,768 - Psest_2462 0.85 -0.3 2,633,768 - Psest_2462 0.85 +0.5 2,633,768 - Psest_2462 0.85 -1.0 2,633,769 + Psest_2462 0.85 -0.3 2,633,769 + Psest_2462 0.85 -2.0 2,633,769 + Psest_2462 0.85 -0.4 2,633,770 - Psest_2462 0.85 -2.5 2,633,770 - Psest_2462 0.85 -0.5 2,633,770 - Psest_2462 0.85 +0.3 2,633,899 + -1.6 2,633,899 + -0.8 2,633,900 - -1.5 2,633,969 - -1.6 2,633,969 - -0.6 2,634,104 - +0.4 2,634,120 + -0.5 2,634,146 + -0.3 2,634,293 + Psest_2463 0.20 -0.2 2,634,646 + Psest_2463 0.55 -0.4 2,634,647 - Psest_2463 0.55 +1.1 2,634,647 - Psest_2463 0.55 +0.9 2,634,647 - Psest_2463 0.55 +0.1
Or see this region's nucleotide sequence