Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00445

Experiment: 4-Hydroxybenzoic Acid (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C) 2.5 mM
90,318	+		PFLU_RS00440	0.60	-1.3
90,388	+		PFLU_RS00440	0.65	-0.1
90,389	-		PFLU_RS00440	0.65	+1.2
90,391	+		PFLU_RS00440	0.65	-0.2
90,391	+		PFLU_RS00440	0.65	+0.4
90,391	+		PFLU_RS00440	0.65	+0.1
90,391	+		PFLU_RS00440	0.65	-1.8
90,391	+		PFLU_RS00440	0.65	+1.9
90,391	+		PFLU_RS00440	0.65	+1.5
90,391	+		PFLU_RS00440	0.65	-0.6
90,391	+		PFLU_RS00440	0.65	+0.4
90,391	+		PFLU_RS00440	0.65	+0.9
90,391	+		PFLU_RS00440	0.65	-0.4
90,391	+		PFLU_RS00440	0.65	+0.9
90,391	+		PFLU_RS00440	0.65	+2.8
90,391	+		PFLU_RS00440	0.65	-1.5
90,391	+		PFLU_RS00440	0.65	+0.5
90,391	+		PFLU_RS00440	0.65	-2.1
90,391	+		PFLU_RS00440	0.65	+1.2
90,391	+		PFLU_RS00440	0.65	-0.6
90,391	+		PFLU_RS00440	0.65	-1.6
90,391	+		PFLU_RS00440	0.65	+0.2
90,391	+		PFLU_RS00440	0.65	+0.4
90,392	-		PFLU_RS00440	0.65	-1.1
90,392	-		PFLU_RS00440	0.65	+0.2
90,392	-		PFLU_RS00440	0.65	+0.6
90,392	-		PFLU_RS00440	0.65	+0.5
90,392	-		PFLU_RS00440	0.65	+0.6
90,392	-		PFLU_RS00440	0.65	+0.7
90,392	-		PFLU_RS00440	0.65	+1.4
90,392	-		PFLU_RS00440	0.65	+0.8
90,392	-		PFLU_RS00440	0.65	-1.4
90,392	-		PFLU_RS00440	0.65	-2.4
90,392	-		PFLU_RS00440	0.65	-0.4
90,392	-		PFLU_RS00440	0.65	-0.9
90,392	-		PFLU_RS00440	0.65	+0.2
90,392	-		PFLU_RS00440	0.65	-0.2
90,392	-		PFLU_RS00440	0.65	-1.5
90,392	-		PFLU_RS00440	0.65	+0.1
90,392	-		PFLU_RS00440	0.65	-2.7
90,392	-		PFLU_RS00440	0.65	-0.1
90,392	-		PFLU_RS00440	0.65	-1.8
90,392	-		PFLU_RS00440	0.65	+0.3
90,392	-		PFLU_RS00440	0.65	-0.1
90,542	+		PFLU_RS00440	0.76	-1.6
90,542	+		PFLU_RS00440	0.76	-0.0
90,542	+		PFLU_RS00440	0.76	-0.1
90,542	+		PFLU_RS00440	0.76	-0.2
90,542	+		PFLU_RS00440	0.76	+1.1
90,542	+		PFLU_RS00440	0.76	+2.8
90,542	+		PFLU_RS00440	0.76	-0.6
90,542	+		PFLU_RS00440	0.76	-1.8
90,543	-		PFLU_RS00440	0.77	+1.6
90,543	-		PFLU_RS00440	0.77	+1.0
90,543	-		PFLU_RS00440	0.77	+0.2
90,543	-		PFLU_RS00440	0.77	+1.8
90,543	-		PFLU_RS00440	0.77	-0.7
90,543	-		PFLU_RS00440	0.77	-0.3
90,543	-		PFLU_RS00440	0.77	+1.1
90,543	-		PFLU_RS00440	0.77	+1.0
90,649	+		PFLU_RS00440	0.84	-0.3
90,649	+		PFLU_RS00440	0.84	+0.1
90,649	+		PFLU_RS00440	0.84	-0.4
90,649	+		PFLU_RS00440	0.84	+1.2
90,649	+		PFLU_RS00440	0.84	+0.6
90,649	+		PFLU_RS00440	0.84	+1.4
90,649	+		PFLU_RS00440	0.84	-0.1
90,649	+		PFLU_RS00440	0.84	-0.4
90,650	-		PFLU_RS00440	0.84	-0.4
90,650	-		PFLU_RS00440	0.84	+0.6
90,650	-		PFLU_RS00440	0.84	+0.9
90,650	-		PFLU_RS00440	0.84	-0.7
90,650	-		PFLU_RS00440	0.84	+1.2
90,650	-		PFLU_RS00440	0.84	-0.9
90,650	-		PFLU_RS00440	0.84	+0.2
90,761	+				+1.0
90,761	+				+0.2
90,761	+				-0.9
90,762	-				-0.6
90,762	-				-0.2
90,762	-				-0.5
90,762	-				-0.2
90,762	-				-0.4
90,762	-				-0.0
90,762	-				+0.2
90,762	-				+0.6
90,762	-				-1.1
90,782	+				-0.4
90,820	+				-2.1
90,820	+				-1.1
90,821	-				-0.5
90,821	-				+0.3
90,821	-				-0.6
90,821	-				+0.2
90,821	-				-0.2
90,821	-				-0.8
90,821	-				+0.3
90,874	+				-1.2
90,874	+				+1.6
90,874	+				+0.8
90,874	+				-0.3
90,874	+				-0.9
90,874	+				+0.3
90,874	+				+0.2
90,874	+				-0.8
90,875	-				+0.6
90,875	-				-0.3
90,875	-				+0.5
90,875	-				-0.8
90,875	-				-0.1
90,875	-				+0.6
90,875	-				-0.2
90,875	-				+0.5
90,875	-				+0.4
90,880	+				-0.1
90,880	+				-0.6
90,880	+				-0.0
90,880	+				-0.6
90,881	-				-1.1
90,881	-				+0.2
90,881	-				+0.4
90,881	-				-0.7
90,881	-				+0.2
90,881	-				+0.4
90,881	-				+0.4
90,896	+				+1.2
90,896	+				+0.7
90,896	+				-1.3
90,896	+				+1.2
90,896	+				+0.4
90,896	+				+1.9
90,897	-				-0.7
90,907	+				-0.4
90,908	-				+0.1
90,908	-				-0.0
90,929	+				+1.6
90,929	+				-0.2
90,930	-				-0.1
90,939	+				-0.6
90,941	+				-0.5
90,942	-				+0.4
90,962	+				-1.1
90,962	+				+0.2
90,962	+				+0.6
90,962	+				-0.5
90,962	+				-0.6
90,963	-				+0.8
90,963	-				-0.2
90,963	-				-0.8
90,963	-				-0.0
90,963	-				+1.2
90,963	-				-0.3
90,963	-				+0.1
90,963	-				+2.6
90,963	-				+0.3
90,963	-				+1.6
90,978	+				-1.3
90,978	+				-1.6
90,978	+				-1.4
90,978	+				-0.1
90,978	+				-0.0
90,978	+				-1.7
90,978	+				-1.3
90,978	+				+0.3
90,978	+				+0.9
90,978	+				-0.5
90,978	+				-0.2
90,978	+				+0.1
90,978	+				+2.2
90,978	+				+0.2
90,978	+				+0.4
90,978	+				-0.0
90,978	+				+0.0
90,979	-				+0.3
90,979	-				+1.0
90,979	-				-0.4
90,979	-				-2.3
90,979	-				-0.5
90,979	-				-0.4
90,979	-				+0.4
90,979	-				+0.6
90,979	-				-0.6
90,979	-				-0.6
90,979	-				-0.3
90,979	-				+1.2
91,044	+				-0.6
91,044	+				-0.7
91,045	-				-1.4
91,045	-				-2.1
91,045	-				-0.1
91,045	-				+1.2
91,045	-				+1.2
91,196	+				-1.3
91,196	+				+0.0
91,196	+				+0.4
91,197	-				-0.5
91,197	-				+0.7
91,206	-				+2.8
91,269	+		PFLU_RS00445	0.11	-1.3
91,269	+		PFLU_RS00445	0.11	-1.4
91,520	+				-0.4
91,520	+				-0.1
91,520	+				-0.8
91,520	+				-1.1
91,520	+				-1.0
91,520	+				-0.2
91,520	+				-0.9
91,520	+				-0.4
91,520	+				-0.6
91,520	+				+0.3
91,520	+				-0.9
91,520	+				-0.2
91,521	-				-0.1
91,521	-				+0.1
91,521	-				-0.2
91,521	-				-1.8
91,521	-				+0.4
91,521	-				-0.9
91,521	-				+0.3
91,521	-				-0.7
91,521	-				+0.4
91,554	-				+0.9
91,561	+				+1.1
91,562	-				-1.2
91,570	+				-2.4
91,570	+				-1.8
91,570	+				+0.9
91,570	+				-0.4
91,570	+				-0.5
91,570	+				-0.2
91,570	+				-0.0
91,571	-				-0.2
91,571	-				+0.4
91,571	-				+0.2
91,571	-				-1.1
91,576	+				-1.6
91,577	-				-2.4
91,577	-				+0.3
91,577	-				-0.3
91,587	+				-0.5
91,587	+				-1.0
91,588	-				-0.2
91,667	-		PFLU_RS30315	0.40	+0.5
91,795	-				-1.6
91,806	-				-0.4
91,888	+		PFLU_RS00455	0.26	-1.9
91,888	+		PFLU_RS00455	0.26	-0.5
91,888	+		PFLU_RS00455	0.26	-0.4
92,002	+		PFLU_RS00455	0.50	-1.2
92,002	+		PFLU_RS00455	0.50	+0.6
92,002	+		PFLU_RS00455	0.50	-0.1
92,002	+		PFLU_RS00455	0.50	+0.6
92,002	+		PFLU_RS00455	0.50	-1.2
92,002	+		PFLU_RS00455	0.50	-0.1
92,002	+		PFLU_RS00455	0.50	+0.5
92,002	+		PFLU_RS00455	0.50	+1.6
92,002	+		PFLU_RS00455	0.50	-1.4
92,002	+		PFLU_RS00455	0.50	-0.1
92,002	+		PFLU_RS00455	0.50	-1.4
92,002	+		PFLU_RS00455	0.50	-0.7
92,002	+		PFLU_RS00455	0.50	-1.0
92,003	-		PFLU_RS00455	0.50	+0.6
92,003	-		PFLU_RS00455	0.50	+0.4
92,003	-		PFLU_RS00455	0.50	+1.4
92,003	-		PFLU_RS00455	0.50	+0.7
92,003	-		PFLU_RS00455	0.50	-0.9
92,003	-		PFLU_RS00455	0.50	+0.6
92,003	-		PFLU_RS00455	0.50	+1.3
92,003	-		PFLU_RS00455	0.50	-1.1
92,003	-		PFLU_RS00455	0.50	+0.1
92,003	-		PFLU_RS00455	0.50	+2.2
92,003	-		PFLU_RS00455	0.50	-0.5
92,003	-		PFLU_RS00455	0.50	-1.3
92,003	-		PFLU_RS00455	0.50	+0.3
92,003	-		PFLU_RS00455	0.50	-0.8
92,089	+		PFLU_RS00455	0.69	-0.5
92,089	+		PFLU_RS00455	0.69	-1.7
92,090	-		PFLU_RS00455	0.69	+0.0
92,090	-		PFLU_RS00455	0.69	-1.8
92,170	-		PFLU_RS00455	0.86	+1.3
92,230	+				+0.5
92,230	+				+0.1
92,230	+				-1.9
92,231	-				+0.6
92,231	-				+0.2
92,233	+				-0.7
92,233	+				+0.1
92,233	+				-0.4
92,233	+				-2.5
92,233	+				-0.1
92,233	+				+1.7
92,233	+				+0.9
92,233	+				-0.9
92,233	+				-0.2
92,233	+				+1.0
92,233	+				+1.0
92,233	+				-0.6
92,234	-				-0.7
92,234	-				+1.1
92,234	-				+1.7
92,234	-				+1.1
92,234	-				-0.5
92,234	-				-0.9
92,234	-				-0.8
92,234	-				+0.9
92,234	-				-0.4
92,234	-				+0.2
92,234	-				+0.4
92,234	-				-0.4
92,234	-				-0.9
92,234	-				+0.5
92,234	-				+0.5
92,234	-				+1.0
92,277	+				-0.2
92,277	+				-0.1
92,277	+				-0.6
92,277	+				+0.5
92,277	+				-0.1
92,277	+				+1.2
92,278	-				+1.9
92,278	-				+1.9
92,378	+				+0.8
92,378	+				-0.1
92,378	+				-0.7
92,378	+				-0.6
92,378	+				-0.2
92,379	-				-0.1
92,379	-				-2.2
92,379	-				-0.1
92,379	-				+0.5
92,385	-				-1.6
92,503	+				-1.6
92,504	-				-0.8
92,504	-				+0.4
92,516	+				+0.4
92,516	+				+0.6
92,517	-				+1.6
92,517	-				-2.2
92,517	-				-1.1
92,517	-				+0.3
92,517	-				-3.0