Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24385

Experiment: 4-Hydroxyphenylpropionic (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxyphenylpropionic (C) 2.5 mM
5,459,880	+		PFLU_RS24380	0.11	+0.7
5,459,880	+		PFLU_RS24380	0.11	+0.4
5,459,880	+		PFLU_RS24380	0.11	-0.6
5,459,880	+		PFLU_RS24380	0.11	-0.6
5,459,881	-		PFLU_RS24380	0.11	-0.1
5,459,881	-		PFLU_RS24380	0.11	-1.3
5,459,881	-		PFLU_RS24380	0.11	+0.7
5,459,932	-		PFLU_RS24380	0.16	-0.0
5,459,932	-		PFLU_RS24380	0.16	-0.3
5,459,932	-		PFLU_RS24380	0.16	+0.7
5,459,932	-		PFLU_RS24380	0.16	-0.2
5,460,180	+		PFLU_RS24380	0.39	-0.0
5,460,186	+		PFLU_RS24380	0.40	-0.7
5,460,186	+		PFLU_RS24380	0.40	-0.1
5,460,186	+		PFLU_RS24380	0.40	-0.4
5,460,186	+		PFLU_RS24380	0.40	-1.2
5,460,186	+		PFLU_RS24380	0.40	+0.1
5,460,186	+		PFLU_RS24380	0.40	+0.2
5,460,186	+		PFLU_RS24380	0.40	-2.2
5,460,186	+		PFLU_RS24380	0.40	-1.1
5,460,186	+		PFLU_RS24380	0.40	-2.4
5,460,186	+		PFLU_RS24380	0.40	-0.2
5,460,186	+		PFLU_RS24380	0.40	-0.3
5,460,186	+		PFLU_RS24380	0.40	-0.3
5,460,186	+		PFLU_RS24380	0.40	+0.3
5,460,186	+		PFLU_RS24380	0.40	-1.6
5,460,186	+		PFLU_RS24380	0.40	-1.1
5,460,186	+		PFLU_RS24380	0.40	-1.0
5,460,186	+		PFLU_RS24380	0.40	-0.4
5,460,186	+		PFLU_RS24380	0.40	+0.4
5,460,187	-		PFLU_RS24380	0.40	-0.8
5,460,187	-		PFLU_RS24380	0.40	-0.3
5,460,187	-		PFLU_RS24380	0.40	-2.4
5,460,187	-		PFLU_RS24380	0.40	+1.6
5,460,187	-		PFLU_RS24380	0.40	+2.0
5,460,187	-		PFLU_RS24380	0.40	+0.7
5,460,187	-		PFLU_RS24380	0.40	+0.2
5,460,187	-		PFLU_RS24380	0.40	-0.0
5,460,187	-		PFLU_RS24380	0.40	-0.1
5,460,187	-		PFLU_RS24380	0.40	-0.3
5,460,187	-		PFLU_RS24380	0.40	+0.7
5,460,187	-		PFLU_RS24380	0.40	-2.1
5,460,187	-		PFLU_RS24380	0.40	+0.7
5,460,187	-		PFLU_RS24380	0.40	-0.6
5,460,187	-		PFLU_RS24380	0.40	+1.1
5,460,187	-		PFLU_RS24380	0.40	-1.9
5,460,187	-		PFLU_RS24380	0.40	+1.4
5,460,187	-		PFLU_RS24380	0.40	-0.3
5,460,187	-		PFLU_RS24380	0.40	+0.7
5,460,187	-		PFLU_RS24380	0.40	+0.7
5,460,195	+		PFLU_RS24380	0.41	-1.2
5,460,195	+		PFLU_RS24380	0.41	-0.7
5,460,195	+		PFLU_RS24380	0.41	-0.2
5,460,360	+		PFLU_RS24380	0.56	-0.3
5,460,501	-		PFLU_RS24380	0.70	-0.6
5,460,637	-		PFLU_RS24380	0.82	+0.3
5,460,725	+				-0.0
5,460,725	+				+1.8
5,460,726	-				-0.9
5,460,726	-				-2.1
5,460,726	-				-1.4
5,460,726	-				-0.6
5,460,729	+				-0.8
5,460,729	+				-0.6
5,460,729	+				-0.6
5,460,729	+				-0.2
5,460,729	+				-1.8
5,460,729	+				-0.5
5,460,729	+				-0.5
5,460,729	+				-0.2
5,460,729	+				-0.8
5,460,729	+				-1.2
5,460,729	+				+0.2
5,460,729	+				-0.0
5,460,729	+				-1.7
5,460,729	+				-1.3
5,460,729	+				-0.5
5,460,729	+				-1.3
5,460,729	+				-0.6
5,460,729	+				+1.0
5,460,729	+				+1.0
5,460,729	+				-1.2
5,460,730	-				+0.4
5,460,730	-				-0.6
5,460,730	-				-0.1
5,460,730	-				+0.4
5,460,730	-				-1.8
5,460,730	-				-1.5
5,460,730	-				-0.0
5,460,730	-				-0.7
5,460,730	-				-2.2
5,460,730	-				+0.7
5,460,730	-				-0.0
5,460,730	-				-1.5
5,460,730	-				+1.0
5,460,730	-				-1.3
5,460,730	-				+0.8
5,460,730	-				-0.6
5,460,730	-				-3.4
5,460,730	-				+0.7
5,460,730	-				+0.0
5,460,730	-				+0.1
5,460,730	-				-1.6
5,460,730	-				+0.3
5,460,730	-				-0.2
5,460,730	-				-1.2
5,460,730	-				-0.2
5,460,730	-				+1.4
5,460,962	+		PFLU_RS24385	0.12	-0.4
5,460,962	+		PFLU_RS24385	0.12	-1.7
5,460,963	-		PFLU_RS24385	0.12	-1.6
5,461,094	+		PFLU_RS24385	0.24	-2.0
5,461,094	+		PFLU_RS24385	0.24	-1.2
5,461,094	+		PFLU_RS24385	0.24	+0.1
5,461,094	+		PFLU_RS24385	0.24	+0.0
5,461,094	+		PFLU_RS24385	0.24	-1.1
5,461,094	+		PFLU_RS24385	0.24	+2.0
5,461,094	+		PFLU_RS24385	0.24	-1.4
5,461,095	-		PFLU_RS24385	0.24	-1.4
5,461,160	+		PFLU_RS24385	0.30	-2.4
5,461,160	+		PFLU_RS24385	0.30	-1.3
5,461,160	+		PFLU_RS24385	0.30	+0.1
5,461,160	+		PFLU_RS24385	0.30	+1.0
5,461,161	-		PFLU_RS24385	0.30	-1.2
5,461,161	-		PFLU_RS24385	0.30	-1.2
5,461,161	-		PFLU_RS24385	0.30	-1.2
5,461,161	-		PFLU_RS24385	0.30	-0.8
5,461,199	+		PFLU_RS24385	0.34	-1.8
5,461,199	+		PFLU_RS24385	0.34	+1.0
5,461,199	+		PFLU_RS24385	0.34	-0.6
5,461,200	-		PFLU_RS24385	0.34	-0.7
5,461,200	-		PFLU_RS24385	0.34	-1.5
5,461,200	-		PFLU_RS24385	0.34	-0.6
5,461,200	-		PFLU_RS24385	0.34	-1.1
5,461,216	+		PFLU_RS24385	0.35	+0.2
5,461,216	+		PFLU_RS24385	0.35	-1.7
5,461,216	+		PFLU_RS24385	0.35	-0.4
5,461,217	-		PFLU_RS24385	0.36	-1.9
5,461,448	-		PFLU_RS24385	0.57	+0.6
5,461,448	-		PFLU_RS24385	0.57	+2.3
5,461,448	-		PFLU_RS24385	0.57	+0.2
5,461,448	-		PFLU_RS24385	0.57	-2.3
5,461,498	+		PFLU_RS24385	0.61	-1.2
5,461,649	+		PFLU_RS24385	0.75	-0.8
5,461,649	+		PFLU_RS24385	0.75	-1.2
5,461,650	-		PFLU_RS24385	0.75	+0.4
5,461,650	-		PFLU_RS24385	0.75	+1.6
5,461,650	-		PFLU_RS24385	0.75	-1.5
5,461,650	-		PFLU_RS24385	0.75	+0.2
5,461,650	-		PFLU_RS24385	0.75	-0.3
5,461,650	-		PFLU_RS24385	0.75	-0.6
5,461,794	+		PFLU_RS24385	0.88	+0.0
5,461,841	+				-1.4
5,461,841	+				-0.8
5,461,842	-				-0.4
5,461,842	-				-1.6
5,461,842	-				+2.0
5,461,842	-				-1.2
5,461,842	-				-0.2
5,461,842	-				-1.5
5,461,842	-				-0.7
5,461,922	+				-0.2
5,461,922	+				-0.6
5,461,922	+				+0.2
5,461,923	-				+0.4
5,461,923	-				-1.4
5,462,008	+				-0.3
5,462,008	+				+0.2
5,462,008	+				+1.5
5,462,009	-				+2.0
5,462,009	-				+1.2
5,462,009	-				-1.5
5,462,018	-				+0.2
5,462,036	+				-0.1
5,462,036	+				+1.4
5,462,037	-				-1.4
5,462,046	+				-1.3
5,462,046	+				-0.2
5,462,046	+				+1.5
5,462,046	+				+2.0
5,462,046	+				+3.0
5,462,047	-				+1.0
5,462,047	-				-1.2
5,462,047	-				-0.7
5,462,047	-				-1.4
5,462,047	-				-1.7
5,462,047	-				-0.6
5,462,047	-				-0.5
5,462,047	-				+2.0
5,462,071	-				+0.9
5,462,077	+				-2.2
5,462,077	+				+0.1
5,462,078	-				-1.2
5,462,078	-				+0.5
5,462,173	+				+2.0
5,462,173	+				+0.3
5,462,173	+				+1.2
5,462,173	+				+0.1
5,462,173	+				-0.6
5,462,173	+				-1.4
5,462,173	+				+1.0
5,462,173	+				-1.3
5,462,173	+				+0.4
5,462,173	+				+3.0
5,462,173	+				-0.2
5,462,173	+				-1.2
5,462,174	-				-0.7
5,462,174	-				-0.7
5,462,174	-				-0.6
5,462,174	-				-0.3
5,462,174	-				+1.0
5,462,174	-				-0.4
5,462,174	-				+2.4
5,462,174	-				-0.0
5,462,174	-				-0.3
5,462,175	+				+0.3
5,462,175	+				-2.4
5,462,175	+				+1.0
5,462,175	+				+1.4
5,462,176	-				-1.0
5,462,176	-				+5.0
5,462,176	-				+0.4
5,462,187	+				+1.1
5,462,188	-				+0.7
5,462,188	-				-1.1
5,462,188	-				+0.8
5,462,188	-				-0.1
5,462,188	-				+0.4
5,462,208	+				+0.3
5,462,208	+				+0.4
5,462,208	+				-0.0
5,462,208	+				+0.2
5,462,208	+				-0.0
5,462,208	+				+0.6
5,462,209	-				+2.0
5,462,209	-				-1.4
5,462,209	-				+1.8
5,462,220	+				+0.4
5,462,221	-				-1.3
5,462,231	+				-0.6
5,462,232	-				+2.4
5,462,232	-				+0.2
5,462,254	+				-0.3
5,462,254	+				+1.0
5,462,254	+				-0.7
5,462,254	+				+0.8
5,462,254	+				+0.4
5,462,254	+				-1.5
5,462,255	-				-0.2
5,462,255	-				+0.4
5,462,255	-				+0.2
5,462,255	-				-0.4
5,462,255	-				-0.0
5,462,255	-				+0.6
5,462,255	-				-0.3
5,462,255	-				-2.0
5,462,255	-				+0.4
5,462,272	+				-0.4
5,462,273	-				+0.9
5,462,273	-				-0.5
5,462,394	+		PFLU_RS24390	0.18	-0.5
5,462,394	+		PFLU_RS24390	0.18	-0.5
5,462,394	+		PFLU_RS24390	0.18	+0.4
5,462,395	-		PFLU_RS24390	0.18	+0.7
5,462,395	-		PFLU_RS24390	0.18	-0.5
5,462,402	+		PFLU_RS24390	0.18	-1.7
5,462,402	+		PFLU_RS24390	0.18	+1.5
5,462,402	+		PFLU_RS24390	0.18	-0.9
5,462,402	+		PFLU_RS24390	0.18	+2.0
5,462,402	+		PFLU_RS24390	0.18	-2.4
5,462,402	+		PFLU_RS24390	0.18	+0.1
5,462,402	+		PFLU_RS24390	0.18	-0.5
5,462,403	-		PFLU_RS24390	0.19	+0.4
5,462,403	-		PFLU_RS24390	0.19	-1.1
5,462,406	+		PFLU_RS24390	0.19	+3.6
5,462,406	+		PFLU_RS24390	0.19	+1.7
5,462,407	-		PFLU_RS24390	0.19	-0.2
5,462,605	+		PFLU_RS24390	0.36	-0.1
5,462,605	+		PFLU_RS24390	0.36	-0.0
5,462,605	+		PFLU_RS24390	0.36	+0.3
5,462,605	+		PFLU_RS24390	0.36	+0.6
5,462,605	+		PFLU_RS24390	0.36	-0.2
5,462,605	+		PFLU_RS24390	0.36	-0.4
5,462,605	+		PFLU_RS24390	0.36	+0.7
5,462,606	-		PFLU_RS24390	0.36	+0.1
5,462,606	-		PFLU_RS24390	0.36	+0.4
5,462,682	+		PFLU_RS24390	0.43	+0.0
5,462,682	+		PFLU_RS24390	0.43	-0.3
5,462,682	+		PFLU_RS24390	0.43	+1.5
5,462,682	+		PFLU_RS24390	0.43	+0.0
5,462,683	-		PFLU_RS24390	0.43	+1.0
5,462,683	-		PFLU_RS24390	0.43	+1.3
5,462,683	-		PFLU_RS24390	0.43	+1.7
5,462,683	-		PFLU_RS24390	0.43	+0.4
5,462,788	+		PFLU_RS24390	0.52	+2.0
5,462,788	+		PFLU_RS24390	0.52	-0.4
5,462,788	+		PFLU_RS24390	0.52	+0.3
5,462,788	+		PFLU_RS24390	0.52	+0.1
5,462,789	-		PFLU_RS24390	0.52	-0.4
5,462,789	-		PFLU_RS24390	0.52	+1.4
5,462,789	-		PFLU_RS24390	0.52	-0.6
5,462,789	-		PFLU_RS24390	0.52	-0.0
5,462,789	-		PFLU_RS24390	0.52	+1.2
5,462,789	-		PFLU_RS24390	0.52	-0.8