Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4324

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
4,523,158	+		Psest_4323	0.40	+0.4
4,523,158	+		Psest_4323	0.40	+1.9
4,523,158	+		Psest_4323	0.40	+0.7
4,523,159	-		Psest_4323	0.40	+0.0
4,523,161	+		Psest_4323	0.40	+0.1
4,523,161	+		Psest_4323	0.40	-1.2
4,523,161	+		Psest_4323	0.40	+0.7
4,523,197	+		Psest_4323	0.43	+0.1
4,523,317	+		Psest_4323	0.54	-0.9
4,523,317	+		Psest_4323	0.54	+0.1
4,523,317	+		Psest_4323	0.54	-0.2
4,523,317	+		Psest_4323	0.54	+0.9
4,523,317	+		Psest_4323	0.54	+0.5
4,523,317	+		Psest_4323	0.54	-0.4
4,523,317	+		Psest_4323	0.54	+1.1
4,523,317	+		Psest_4323	0.54	+0.1
4,523,317	+		Psest_4323	0.54	-1.4
4,523,317	+		Psest_4323	0.54	-1.8
4,523,317	+		Psest_4323	0.54	-1.3
4,523,317	+		Psest_4323	0.54	-1.5
4,523,318	-		Psest_4323	0.55	+0.0
4,523,318	-		Psest_4323	0.55	+0.2
4,523,318	-		Psest_4323	0.55	-1.9
4,523,318	-		Psest_4323	0.55	-1.8
4,523,318	-		Psest_4323	0.55	-1.2
4,523,318	-		Psest_4323	0.55	+0.9
4,523,318	-		Psest_4323	0.55	+2.0
4,523,318	-		Psest_4323	0.55	+1.7
4,523,318	-		Psest_4323	0.55	+0.4
4,523,318	-		Psest_4323	0.55	-0.4
4,523,318	-		Psest_4323	0.55	+0.1
4,523,318	-		Psest_4323	0.55	-0.3
4,523,318	-		Psest_4323	0.55	+0.9
4,523,318	-		Psest_4323	0.55	-1.0
4,523,318	-		Psest_4323	0.55	+0.1
4,523,318	-		Psest_4323	0.55	-0.7
4,523,318	-		Psest_4323	0.55	+0.1
4,523,318	-		Psest_4323	0.55	-0.3
4,523,318	-		Psest_4323	0.55	-0.1
4,523,371	+		Psest_4323	0.59	-0.9
4,523,372	-		Psest_4323	0.60	-0.9
4,523,434	+		Psest_4323	0.65	-0.1
4,523,435	-		Psest_4323	0.65	+0.5
4,523,435	-		Psest_4323	0.65	-0.4
4,523,435	-		Psest_4323	0.65	+1.3
4,523,435	-		Psest_4323	0.65	+1.4
4,523,559	+		Psest_4323	0.77	-0.3
4,523,662	+		Psest_4323	0.87	+1.0
4,523,714	-				-0.2
4,523,714	-				-1.1
4,523,717	+				+1.3
4,523,718	-				+2.1
4,523,718	-				+0.5
4,523,718	-				+0.9
4,523,718	-				-0.7
4,523,718	-				-0.8
4,523,718	-				+0.5
4,523,727	+				+0.0
4,523,861	+				-0.8
4,523,861	+				-0.6
4,523,861	+				-1.3
4,523,861	+				-0.2
4,523,861	+				+0.6
4,523,861	+				+0.0
4,523,861	+				-0.9
4,523,861	+				+0.2
4,523,861	+				-1.1
4,523,861	+				+0.3
4,523,861	+				-1.1
4,523,861	+				+0.8
4,523,861	+				+0.7
4,523,861	+				+1.3
4,523,861	+				-0.5
4,523,861	+				-0.7
4,523,861	+				+1.9
4,523,862	-				+0.5
4,523,862	-				-0.3
4,523,862	-				+0.1
4,523,862	-				-2.3
4,523,862	-				-0.4
4,523,862	-				-0.8
4,523,862	-				-1.6
4,523,864	+				+0.2
4,523,864	+				+0.3
4,524,066	-				-1.1
4,524,066	-				-2.9
4,524,070	+				+0.4
4,524,070	+				+0.3
4,524,070	+				-0.2
4,524,071	-				-0.8
4,524,071	-				+0.4
4,524,071	-				-0.8
4,524,071	-				-1.5
4,524,071	-				-1.5
4,524,084	-				-2.5
4,524,100	-				-1.5
4,524,100	-				-0.0
4,524,236	+		Psest_4324	0.12	+1.0
4,524,237	-		Psest_4324	0.13	-0.3
4,524,237	-		Psest_4324	0.13	+1.6
4,524,237	-		Psest_4324	0.13	+1.4
4,524,237	-		Psest_4324	0.13	+1.5
4,524,237	-		Psest_4324	0.13	+0.2
4,524,340	+		Psest_4324	0.22	-0.2
4,524,340	+		Psest_4324	0.22	+0.0
4,524,340	+		Psest_4324	0.22	+0.4
4,524,341	-		Psest_4324	0.22	-0.3
4,524,341	-		Psest_4324	0.22	+3.6
4,524,341	-		Psest_4324	0.22	-2.4
4,524,341	-		Psest_4324	0.22	-1.1
4,524,341	-		Psest_4324	0.22	+0.0
4,524,505	+		Psest_4324	0.38	-1.0
4,524,505	+		Psest_4324	0.38	+1.9
4,524,744	-		Psest_4324	0.60	+2.0
4,524,874	+		Psest_4324	0.72	+0.5
4,525,111	+				-0.7
4,525,112	-				-0.3
4,525,154	+				-0.1
4,525,154	+				-1.5
4,525,154	+				-1.2
4,525,155	-				+0.1
4,525,155	-				-0.7
4,525,155	-				-1.3
4,525,191	+				-0.5
4,525,191	+				-1.8
4,525,191	+				-0.2
4,525,191	+				+0.3
4,525,192	-				-1.1
4,525,192	-				-0.9
4,525,192	-				-0.3
4,525,192	-				-1.7
4,525,192	-				-0.2
4,525,192	-				-0.7
4,525,314	+				-0.9
4,525,314	+				+0.8
4,525,387	+				+1.3
4,525,516	+		Psest_4325	0.16	+0.1
4,525,517	-		Psest_4325	0.16	-0.1
4,525,517	-		Psest_4325	0.16	+0.7
4,525,737	+		Psest_4325	0.75	+0.3
4,525,828	+				-0.3
4,525,828	+				+0.9
4,525,854	+				-0.8
4,525,854	+				-1.3
4,525,854	+				+2.4
4,525,855	-				+0.5
4,525,855	-				-0.8
4,525,855	-				-0.7
4,525,855	-				+0.0
4,525,856	+				+0.7
4,525,857	-				+3.2
4,525,857	-				-1.9
4,525,857	-				+0.5
4,525,868	+				+0.2
4,525,874	+				-1.6
4,525,874	+				+0.4
4,525,875	-				+1.4
4,525,968	+				-0.4
4,525,968	+				-1.0
4,525,968	+				+0.7
4,525,969	-				-0.5
4,526,048	+				-1.5
4,526,109	+				+1.8
4,526,110	-				+0.6
4,526,110	-				+0.3
4,526,110	-				-0.5