Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3521

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
3,700,017	-		Psest_3520	0.65	-2.6
3,700,079	+		Psest_3520	0.70	-2.0
3,700,079	+		Psest_3520	0.70	-0.1
3,700,080	-		Psest_3520	0.70	-0.8
3,700,469	+				+0.2
3,700,469	+				+0.9
3,700,469	+				+1.3
3,700,469	+				-0.3
3,700,469	+				-2.5
3,700,470	-				+0.1
3,700,470	-				+0.0
3,700,485	-				+0.0
3,700,940	+		Psest_3521	0.13	+1.8
3,700,940	+		Psest_3521	0.13	-1.4
3,700,940	+		Psest_3521	0.13	+0.9
3,700,940	+		Psest_3521	0.13	+2.8
3,700,940	+		Psest_3521	0.13	+2.4
3,700,940	+		Psest_3521	0.13	-0.5
3,700,941	-		Psest_3521	0.13	+0.2
3,700,941	-		Psest_3521	0.13	+0.2
3,700,941	-		Psest_3521	0.13	+2.7
3,701,088	-		Psest_3521	0.24	+1.0
3,701,127	-		Psest_3521	0.27	-1.9
3,701,390	+		Psest_3521	0.45	+0.1
3,701,431	+		Psest_3521	0.48	-0.8
3,702,062	+				-1.4
3,702,062	+				+0.3
3,702,062	+				-2.2
3,702,062	+				-1.3
3,702,063	-				-0.6
3,702,063	-				-0.6
3,702,063	-				-0.3
3,702,063	-				-1.7
3,702,063	-				+0.8
3,702,125	+				-1.0
3,702,125	+				+0.1
3,702,126	-				+1.4
3,702,128	+				-0.3
3,702,128	+				+1.8
3,702,128	+				+0.1
3,702,128	+				-0.7
3,702,128	+				-0.4
3,702,129	-				-0.1
3,702,129	-				+0.2
3,702,129	-				+1.3
3,702,129	-				-1.4
3,702,129	-				-1.6
3,702,718	-		Psest_3522	0.59	-2.5
3,702,718	-		Psest_3522	0.59	+0.5
3,702,718	-		Psest_3522	0.59	-0.2
3,702,832	+		Psest_3522	0.74	-0.4
3,702,832	+		Psest_3522	0.74	-0.8
3,702,832	+		Psest_3522	0.74	+1.1
3,702,833	-		Psest_3522	0.74	+2.7
3,702,833	-		Psest_3522	0.74	-1.4
3,703,114	+				+0.0
3,703,114	+				+0.3
3,703,114	+				+0.9
3,703,114	+				+0.8
3,703,114	+				-1.1
3,703,114	+				+0.9
3,703,118	+				-2.4