Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2849

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
3,037,997	+		Psest_2846	0.56	-0.9
3,038,120	+				-1.9
3,038,121	-				-0.7
3,038,121	-				+0.0
3,038,161	+				+1.3
3,038,197	+		Psest_2847	0.17	-0.3
3,038,298	+		Psest_2847	0.55	+1.1
3,038,298	+		Psest_2847	0.55	+0.1
3,038,299	-		Psest_2847	0.55	-0.1
3,038,299	-		Psest_2847	0.55	-1.5
3,038,299	-		Psest_2847	0.55	-2.1
3,038,405	+				+0.3
3,038,406	-				+0.6
3,038,409	+				+0.3
3,038,410	-				+0.0
3,038,447	+				+0.9
3,038,447	+				+0.4
3,038,448	-				-1.9
3,038,448	-				-1.2
3,038,448	-				+3.2
3,038,448	-				+0.8
3,038,448	-				+0.2
3,038,448	-				-2.2
3,038,696	+		Psest_2848	0.58	-0.4
3,038,784	+		Psest_2848	0.76	+0.5
3,038,932	+				-2.0
3,038,933	-				+1.9
3,039,327	+		Psest_2849	0.28	+1.6
3,039,327	+		Psest_2849	0.28	-1.2
3,039,327	+		Psest_2849	0.28	+0.5
3,039,328	-		Psest_2849	0.28	-0.7
3,039,328	-		Psest_2849	0.28	-0.4
3,039,328	-		Psest_2849	0.28	+0.1
3,039,403	+		Psest_2849	0.33	-0.8
3,039,407	-		Psest_2849	0.34	-2.3
3,039,407	-		Psest_2849	0.34	-0.6
3,039,407	-		Psest_2849	0.34	-1.8
3,039,484	+		Psest_2849	0.39	-0.3
3,039,582	-		Psest_2849	0.45	-0.8
3,039,621	-		Psest_2849	0.48	-0.2
3,039,621	-		Psest_2849	0.48	-0.4
3,039,700	+		Psest_2849	0.53	+0.2
3,039,701	-		Psest_2849	0.53	-1.4
3,039,721	+		Psest_2849	0.55	-0.1
3,039,863	-		Psest_2849	0.64	-0.1
3,039,919	+		Psest_2849	0.68	-2.0
3,039,920	-		Psest_2849	0.68	-1.0
3,039,920	-		Psest_2849	0.68	-1.7
3,039,920	-		Psest_2849	0.68	-1.8
3,039,920	-		Psest_2849	0.68	-2.3
3,039,920	-		Psest_2849	0.68	-0.2
3,039,974	-		Psest_2849	0.72	-1.6
3,040,067	-		Psest_2849	0.78	-0.2
3,040,222	+		Psest_2849	0.88	+1.3
3,040,222	+		Psest_2849	0.88	+0.7
3,040,223	-		Psest_2849	0.88	-1.4
3,040,223	-		Psest_2849	0.88	+0.6
3,040,270	-				-1.0
3,040,270	-				-2.0
3,040,507	+		Psest_2850	0.33	-0.7
3,040,508	-		Psest_2850	0.33	+0.4
3,040,705	+				-0.7
3,040,706	-				-1.2
3,040,811	+				+1.2
3,040,811	+				+0.7
3,040,811	+				-0.4
3,040,811	+				+0.0
3,040,974	-				+0.1
3,041,049	+		Psest_2851	0.12	+1.3
3,041,050	-		Psest_2851	0.12	-3.9
3,041,050	-		Psest_2851	0.12	-1.1
3,041,240	+		Psest_2851	0.18	-0.1
3,041,241	-		Psest_2851	0.18	+0.0
3,041,241	-		Psest_2851	0.18	-0.5
3,041,241	-		Psest_2851	0.18	-0.1
3,041,244	+		Psest_2851	0.19	+1.0
3,041,244	+		Psest_2851	0.19	+2.1
3,041,287	-		Psest_2851	0.20	-1.0
3,041,384	+		Psest_2851	0.24	-1.1