Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2647

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
2,828,732	-		Psest_2645	0.82	+0.7
2,828,732	-		Psest_2645	0.82	-1.1
2,828,897	-				+0.6
2,829,030	+				+0.6
2,829,031	-				+0.3
2,829,031	-				+0.2
2,829,031	-				-1.3
2,829,032	+				-0.2
2,829,032	+				+0.5
2,829,033	-				-0.4
2,829,033	-				+0.5
2,829,034	+				-0.4
2,829,035	-				+0.8
2,829,035	-				-1.9
2,829,035	-				-0.6
2,829,051	+				+1.2
2,829,270	+		Psest_2646	0.33	-1.2
2,829,270	+		Psest_2646	0.33	-0.8
2,829,270	+		Psest_2646	0.33	+0.3
2,829,644	+				+1.7
2,829,644	+				-0.4
2,829,645	-				-0.8
2,829,689	+				-0.1
2,829,689	+				-1.4
2,829,689	+				+0.8
2,829,810	+		Psest_2647	0.25	-1.0
2,829,811	-		Psest_2647	0.25	-0.8
2,830,052	+		Psest_2647	0.76	+0.3
2,830,149	-				-1.3
2,830,192	+				+0.4
2,830,193	-				+0.4
2,830,205	+				-0.1
2,830,206	-				+2.0
2,830,206	-				-0.5
2,830,206	-				+0.8
2,830,217	+				-1.3
2,830,445	+		Psest_2648	0.86	+0.4
2,830,446	-		Psest_2648	0.86	+1.7
2,830,446	-		Psest_2648	0.86	+1.2
2,830,471	+				+1.3
2,830,472	-				+0.7
2,830,472	-				-0.3
2,830,472	-				-1.6
2,830,509	-				+1.1
2,830,628	+				-0.9
2,830,628	+				+0.5
2,830,628	+				+0.3
2,830,629	-				-0.5
2,830,924	+		Psest_2649	0.29	+1.4
2,830,924	+		Psest_2649	0.29	+0.7
2,830,924	+		Psest_2649	0.29	-0.6
2,830,924	+		Psest_2649	0.29	-2.0
2,830,924	+		Psest_2649	0.29	-1.6
2,830,924	+		Psest_2649	0.29	-1.2
2,830,924	+		Psest_2649	0.29	-0.1
2,830,924	+		Psest_2649	0.29	-0.3
2,830,924	+		Psest_2649	0.29	+0.6
2,830,924	+		Psest_2649	0.29	-0.1
2,830,924	+		Psest_2649	0.29	-0.3
2,830,924	+		Psest_2649	0.29	+1.9
2,830,925	-		Psest_2649	0.29	-0.1
2,830,925	-		Psest_2649	0.29	-0.7
2,830,925	-		Psest_2649	0.29	+1.3
2,830,925	-		Psest_2649	0.29	+1.5
2,830,925	-		Psest_2649	0.29	-0.1
2,830,925	-		Psest_2649	0.29	+1.7
2,830,925	-		Psest_2649	0.29	-0.1
2,830,925	-		Psest_2649	0.29	+0.1
2,830,926	+		Psest_2649	0.30	-0.9
2,830,926	+		Psest_2649	0.30	-1.5
2,830,926	+		Psest_2649	0.30	-0.3
2,830,926	+		Psest_2649	0.30	-1.9
2,830,926	+		Psest_2649	0.30	+0.9
2,830,927	-		Psest_2649	0.30	-1.2
2,830,927	-		Psest_2649	0.30	+0.5
2,831,149	+		Psest_2649	0.56	-1.2
2,831,149	+		Psest_2649	0.56	-0.6
2,831,149	+		Psest_2649	0.56	+0.2
2,831,149	+		Psest_2649	0.56	-0.4
2,831,149	+		Psest_2649	0.56	+0.2
2,831,149	+		Psest_2649	0.56	+1.1
2,831,150	-		Psest_2649	0.56	-0.2
2,831,150	-		Psest_2649	0.56	-0.4