Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2443

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
2,610,010	+		Psest_2441	0.83	+1.6
2,610,010	+		Psest_2441	0.83	+0.4
2,610,034	-		Psest_2441	0.87	+0.8
2,610,050	+				+0.4
2,610,239	+				-1.4
2,610,239	+				-0.7
2,610,239	+				+0.2
2,610,384	+				+2.6
2,610,384	+				+2.8
2,610,384	+				+0.5
2,610,384	+				-0.1
2,610,385	-				+0.6
2,610,385	-				-0.4
2,610,385	-				-0.5
2,610,385	-				+1.3
2,610,385	-				+0.4
2,610,385	-				+1.7
2,610,419	+				+0.4
2,610,468	-				+0.6
2,610,614	-		Psest_2442	0.73	-0.9
2,610,614	-		Psest_2442	0.73	+0.4
2,610,614	-		Psest_2442	0.73	+0.2
2,610,665	+				-1.5
2,610,665	+				+0.6
2,610,666	-				+1.0
2,610,669	-				+0.3
2,610,689	+				-0.7
2,610,707	+				+1.1
2,610,708	-				+1.7
2,610,749	-				+1.4
2,610,800	+				+1.6
2,610,809	-				-0.6
2,610,818	-				-1.5
2,610,818	-				+0.4
2,610,818	-				+1.1
2,610,873	+				+0.3
2,610,873	+				+0.5
2,610,874	-				-1.3
2,610,874	-				-0.5
2,610,875	+				+0.1
2,610,875	+				+0.8
2,610,876	-				+1.5
2,610,881	-				+0.4
2,610,913	+				+0.6
2,610,914	-				-1.0
2,610,914	-				-0.2
2,611,019	+				+0.2
2,611,019	+				+0.6
2,611,358	-		Psest_2443	0.36	-1.9
2,611,358	-		Psest_2443	0.36	+2.2
2,611,361	+		Psest_2443	0.37	-0.1
2,611,361	+		Psest_2443	0.37	-2.8
2,611,361	+		Psest_2443	0.37	+0.0
2,611,362	-		Psest_2443	0.37	-1.4
2,611,362	-		Psest_2443	0.37	-0.4
2,611,362	-		Psest_2443	0.37	-0.9
2,611,362	-		Psest_2443	0.37	-0.2
2,611,362	-		Psest_2443	0.37	-0.6
2,611,362	-		Psest_2443	0.37	-1.3
2,611,362	-		Psest_2443	0.37	-0.6
2,611,362	-		Psest_2443	0.37	-1.2
2,611,362	-		Psest_2443	0.37	-1.3
2,611,385	+		Psest_2443	0.39	+0.9
2,611,386	-		Psest_2443	0.39	-0.3
2,611,386	-		Psest_2443	0.39	-0.5
2,611,540	+		Psest_2443	0.53	-0.1
2,611,541	-		Psest_2443	0.53	+2.0
2,611,541	-		Psest_2443	0.53	+1.2
2,611,639	+		Psest_2443	0.62	+0.9
2,611,639	+		Psest_2443	0.62	-0.6
2,611,639	+		Psest_2443	0.62	+0.9
2,611,639	+		Psest_2443	0.62	+0.2
2,611,640	-		Psest_2443	0.63	+0.8
2,611,640	-		Psest_2443	0.63	-0.3
2,611,640	-		Psest_2443	0.63	-2.1
2,611,640	-		Psest_2443	0.63	-0.7
2,611,640	-		Psest_2443	0.63	-0.2
2,611,640	-		Psest_2443	0.63	-0.4
2,611,640	-		Psest_2443	0.63	-0.4
2,611,640	-		Psest_2443	0.63	-1.8
2,611,640	-		Psest_2443	0.63	+1.8
2,611,640	-		Psest_2443	0.63	-1.6
2,611,640	-		Psest_2443	0.63	+0.1
2,611,705	+		Psest_2443	0.69	-2.4
2,611,710	+		Psest_2443	0.69	-0.3
2,611,710	+		Psest_2443	0.69	-0.9
2,611,710	+		Psest_2443	0.69	-1.3
2,611,711	-		Psest_2443	0.69	-0.9
2,611,711	-		Psest_2443	0.69	+0.1
2,611,711	-		Psest_2443	0.69	+0.1
2,611,721	+		Psest_2443	0.70	-1.3
2,611,941	-				+1.0
2,612,057	+				-0.1
2,612,057	+				+0.9
2,612,057	+				+2.3
2,612,106	-				-0.9
2,612,161	+				+0.9
2,612,296	+		Psest_2444	0.11	-1.3
2,612,417	-		Psest_2444	0.18	+0.8
2,612,477	-		Psest_2444	0.22	+0.8
2,612,477	-		Psest_2444	0.22	-1.8
2,612,562	+		Psest_2444	0.27	-0.4
2,612,565	+		Psest_2444	0.27	+1.5
2,612,811	+		Psest_2444	0.42	-0.8
2,612,812	-		Psest_2444	0.42	-1.0
2,612,919	+		Psest_2444	0.49	+0.6
2,612,919	+		Psest_2444	0.49	+0.5
2,612,919	+		Psest_2444	0.49	+1.5
2,612,919	+		Psest_2444	0.49	+0.0
2,612,919	+		Psest_2444	0.49	+0.1
2,612,920	-		Psest_2444	0.49	-2.0
2,612,920	-		Psest_2444	0.49	+1.5
2,612,920	-		Psest_2444	0.49	-0.6
2,612,920	-		Psest_2444	0.49	+0.9
2,612,920	-		Psest_2444	0.49	+0.2
2,612,920	-		Psest_2444	0.49	+0.2
2,612,920	-		Psest_2444	0.49	+1.0
2,612,920	-		Psest_2444	0.49	+0.4
2,612,920	-		Psest_2444	0.49	-0.5
2,612,920	-		Psest_2444	0.49	+1.9