Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2124

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
2,254,535	-		Psest_2123	0.41	-0.9
2,254,664	+		Psest_2123	0.52	-2.8
2,254,665	-		Psest_2123	0.52	-2.5
2,254,698	+		Psest_2123	0.55	+1.1
2,255,228	-				+0.4
2,255,228	-				-0.2
2,255,255	+				+0.8
2,255,256	-				+0.7
2,255,256	-				+0.1
2,255,256	-				-0.6
2,255,256	-				+0.9
2,255,256	-				+0.8
2,255,256	-				-0.1
2,255,508	+		Psest_2124	0.20	+0.2
2,255,509	-		Psest_2124	0.20	-0.4
2,255,509	-		Psest_2124	0.20	-0.1
2,255,509	-		Psest_2124	0.20	-0.2
2,255,730	+		Psest_2124	0.37	-0.3
2,255,730	+		Psest_2124	0.37	-1.0
2,255,730	+		Psest_2124	0.37	+0.6
2,255,731	-		Psest_2124	0.37	-2.2
2,255,994	+		Psest_2124	0.58	-0.8
2,255,994	+		Psest_2124	0.58	-1.1
2,256,123	+		Psest_2124	0.68	+0.2
2,256,123	+		Psest_2124	0.68	-1.3
2,256,123	+		Psest_2124	0.68	-1.2
2,256,123	+		Psest_2124	0.68	-0.3
2,256,123	+		Psest_2124	0.68	+0.4
2,256,123	+		Psest_2124	0.68	-0.9
2,256,124	-		Psest_2124	0.68	+0.9
2,256,458	+				+0.1
2,256,458	+				+0.6
2,256,459	-				-0.3
2,256,462	+				+0.0
2,256,462	+				+0.2
2,256,462	+				-0.8
2,256,462	+				-0.1
2,256,462	+				-0.9
2,256,462	+				+0.4
2,256,463	-				+1.4
2,256,463	-				+0.2
2,256,463	-				+0.2
2,256,463	-				-1.1
2,256,798	+		Psest_2125	0.20	+1.6
2,256,798	+		Psest_2125	0.20	+0.5
2,256,799	-		Psest_2125	0.20	-1.2
2,256,799	-		Psest_2125	0.20	-0.8
2,256,799	-		Psest_2125	0.20	-0.7
2,257,270	+		Psest_2125	0.66	-1.3
2,257,271	-		Psest_2125	0.66	-0.3
2,257,285	+		Psest_2125	0.68	-0.2
2,257,285	+		Psest_2125	0.68	-0.3
2,257,285	+		Psest_2125	0.68	+0.9
2,257,309	+		Psest_2125	0.70	-1.1