Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1621

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
1,724,174	+		Psest_1620	0.36	+1.2
1,724,174	+		Psest_1620	0.36	-2.6
1,724,174	+		Psest_1620	0.36	-0.0
1,724,175	-		Psest_1620	0.36	+1.7
1,724,175	-		Psest_1620	0.36	-0.1
1,724,175	-		Psest_1620	0.36	+0.3
1,724,555	+		Psest_1620	0.66	+1.2
1,724,555	+		Psest_1620	0.66	+0.2
1,724,555	+		Psest_1620	0.66	+0.4
1,724,555	+		Psest_1620	0.66	+0.6
1,724,555	+		Psest_1620	0.66	+0.3
1,724,589	-		Psest_1620	0.68	-0.4
1,724,589	-		Psest_1620	0.68	+0.1
1,724,646	-		Psest_1620	0.73	-1.3
1,724,646	-		Psest_1620	0.73	+0.5
1,724,663	+		Psest_1620	0.74	+0.2
1,724,663	+		Psest_1620	0.74	-0.1
1,724,690	+		Psest_1620	0.76	+1.0
1,724,690	+		Psest_1620	0.76	+0.6
1,724,690	+		Psest_1620	0.76	+0.0
1,724,690	+		Psest_1620	0.76	-2.3
1,724,691	-		Psest_1620	0.76	-3.8
1,724,691	-		Psest_1620	0.76	-0.8
1,724,691	-		Psest_1620	0.76	+0.0
1,724,814	-		Psest_1620	0.86	-0.7
1,724,909	+				+1.1
1,724,909	+				+2.5
1,724,910	-				+0.6
1,724,910	-				-1.8
1,724,987	+				+1.7
1,724,996	+				-0.6
1,724,997	-				-1.2
1,724,997	-				+2.0
1,724,997	-				+0.7
1,725,306	+		Psest_1621	0.20	+0.6
1,725,307	-		Psest_1621	0.20	-1.0
1,725,315	+		Psest_1621	0.20	+0.2
1,725,315	+		Psest_1621	0.20	-0.8
1,725,315	+		Psest_1621	0.20	-1.4
1,725,315	+		Psest_1621	0.20	-1.9
1,725,316	-		Psest_1621	0.21	-0.1
1,725,316	-		Psest_1621	0.21	+0.1
1,725,316	-		Psest_1621	0.21	-0.1
1,725,316	-		Psest_1621	0.21	-1.1
1,725,369	+		Psest_1621	0.25	-0.4
1,725,656	-		Psest_1621	0.51	-0.3
1,725,747	+		Psest_1621	0.59	-0.3
1,725,769	-		Psest_1621	0.61	-2.3
1,725,769	-		Psest_1621	0.61	-1.1
1,725,769	-		Psest_1621	0.61	-2.2
1,725,769	-		Psest_1621	0.61	-1.5
1,725,918	+		Psest_1621	0.74	-0.5
1,726,092	+		Psest_1621	0.89	+0.6
1,726,096	+		Psest_1621	0.89	+0.6
1,726,096	+		Psest_1621	0.89	-1.6
1,726,096	+		Psest_1621	0.89	-0.2
1,726,096	+		Psest_1621	0.89	+0.3
1,726,096	+		Psest_1621	0.89	-1.6
1,726,096	+		Psest_1621	0.89	+0.3
1,726,096	+		Psest_1621	0.89	+0.0
1,726,096	+		Psest_1621	0.89	-0.3
1,726,097	-		Psest_1621	0.90	+0.4
1,726,097	-		Psest_1621	0.90	-0.4
1,726,097	-		Psest_1621	0.90	-0.2
1,726,212	+				+0.9
1,726,212	+				+0.2
1,726,213	-				-0.0
1,726,316	-		Psest_1622	0.22	-2.6
1,726,389	-		Psest_1622	0.39	+0.6
1,726,406	-		Psest_1622	0.43	+1.4
1,726,406	-		Psest_1622	0.43	+0.2
1,726,406	-		Psest_1622	0.43	+0.8
1,726,584	+		Psest_1622	0.85	-3.0
1,726,584	+		Psest_1622	0.85	-0.1
1,726,585	-		Psest_1622	0.85	-0.7
1,726,694	-				-1.0
1,726,705	+				+0.3
1,726,784	-				+1.2
1,726,852	+		Psest_1623	0.20	-2.0
1,726,853	-		Psest_1623	0.20	-1.8
1,727,117	+		Psest_1623	0.68	-2.7
1,727,131	+		Psest_1623	0.70	+0.7
1,727,131	+		Psest_1623	0.70	-0.1
1,727,131	+		Psest_1623	0.70	-1.1
1,727,132	-		Psest_1623	0.70	-0.2
1,727,136	-		Psest_1623	0.71	-1.6