Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1185

Experiment: syringaldehyde 4 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 4 mM
1,286,361	-		Psest_1183	0.39	-0.4
1,286,364	+		Psest_1183	0.40	+1.2
1,286,365	-		Psest_1183	0.40	+0.2
1,286,365	-		Psest_1183	0.40	-0.7
1,286,599	+				+1.8
1,286,599	+				+0.1
1,286,600	-				+1.3
1,286,600	-				+0.7
1,287,089	+		Psest_1184	0.86	+0.9
1,287,089	+		Psest_1184	0.86	-0.8
1,287,089	+		Psest_1184	0.86	-1.4
1,287,089	+		Psest_1184	0.86	+1.5
1,287,089	+		Psest_1184	0.86	+1.7
1,287,089	+		Psest_1184	0.86	-0.2
1,287,089	+		Psest_1184	0.86	-1.4
1,287,089	+		Psest_1184	0.86	+1.3
1,287,090	-		Psest_1184	0.86	+0.6
1,287,090	-		Psest_1184	0.86	-0.2
1,287,090	-		Psest_1184	0.86	-1.4
1,287,206	+				-0.6
1,287,206	+				-1.9
1,287,207	-				-1.2
1,287,216	+				-0.7
1,287,216	+				-2.1
1,287,217	-				-1.3
1,287,248	+				-1.8
1,287,248	+				+2.0
1,287,248	+				+0.5
1,287,248	+				-1.1
1,287,248	+				-1.2
1,287,248	+				-1.2
1,287,248	+				-0.9
1,287,248	+				-1.0
1,287,248	+				-0.3
1,287,248	+				+0.6
1,287,249	-				+1.4
1,287,249	-				-0.5
1,287,249	-				-0.1
1,287,315	+				-1.7
1,287,315	+				-1.6
1,287,384	+		Psest_1185	0.16	-0.9
1,287,384	+		Psest_1185	0.16	-0.7
1,287,385	-		Psest_1185	0.17	-1.0
1,287,461	-		Psest_1185	0.28	-0.6
1,287,900	-				+0.5
1,287,924	+				+1.3
1,287,924	+				-0.4
1,287,924	+				+1.0
1,288,031	+				+0.0
1,288,032	-				+0.5
1,288,032	-				+0.4
1,288,032	-				-1.2
1,288,032	-				+0.7
1,288,032	-				+0.0
1,288,038	-				-0.5
1,288,038	-				-0.6
1,288,083	+		Psest_1186	0.10	+0.9
1,288,083	+		Psest_1186	0.10	+0.5
1,288,102	+		Psest_1186	0.12	+0.1
1,288,103	-		Psest_1186	0.12	+1.6
1,288,163	+		Psest_1186	0.16	-0.1
1,288,163	+		Psest_1186	0.16	-0.3
1,288,204	-		Psest_1186	0.19	+1.0
1,288,407	+		Psest_1186	0.34	-0.5
1,288,408	-		Psest_1186	0.34	+1.4
1,288,408	-		Psest_1186	0.34	+0.6
1,288,776	-		Psest_1186	0.61	-1.0