Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS04810

Experiment: p-Coumaric (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) 2.5 mM
1,074,967	+		PFLU_RS04805	0.19	+0.5
1,074,967	+		PFLU_RS04805	0.19	+0.8
1,074,967	+		PFLU_RS04805	0.19	+0.8
1,074,967	+		PFLU_RS04805	0.19	+0.5
1,074,968	-		PFLU_RS04805	0.19	-0.4
1,074,968	-		PFLU_RS04805	0.19	+0.3
1,074,968	-		PFLU_RS04805	0.19	+0.7
1,074,968	-		PFLU_RS04805	0.19	+0.8
1,074,968	-		PFLU_RS04805	0.19	+0.4
1,074,968	-		PFLU_RS04805	0.19	+1.3
1,074,968	-		PFLU_RS04805	0.19	+0.0
1,074,968	-		PFLU_RS04805	0.19	-0.5
1,074,968	-		PFLU_RS04805	0.19	+0.9
1,075,227	-		PFLU_RS04805	0.46	+0.7
1,075,234	+		PFLU_RS04805	0.47	-0.3
1,075,234	+		PFLU_RS04805	0.47	+0.5
1,075,235	-		PFLU_RS04805	0.47	-1.4
1,075,235	-		PFLU_RS04805	0.47	+0.2
1,075,235	-		PFLU_RS04805	0.47	+0.6
1,075,247	+		PFLU_RS04805	0.48	-1.9
1,075,248	-		PFLU_RS04805	0.48	+0.7
1,075,504	+		PFLU_RS04805	0.74	-0.8
1,075,504	+		PFLU_RS04805	0.74	-1.0
1,075,504	+		PFLU_RS04805	0.74	-0.1
1,075,504	+		PFLU_RS04805	0.74	+0.5
1,075,505	-		PFLU_RS04805	0.74	+0.7
1,075,505	-		PFLU_RS04805	0.74	+0.3
1,075,505	-		PFLU_RS04805	0.74	-0.2
1,075,516	+		PFLU_RS04805	0.75	-0.9
1,075,516	+		PFLU_RS04805	0.75	+1.1
1,075,516	+		PFLU_RS04805	0.75	+0.3
1,075,516	+		PFLU_RS04805	0.75	+0.3
1,075,516	+		PFLU_RS04805	0.75	-0.3
1,075,516	+		PFLU_RS04805	0.75	+0.6
1,075,516	+		PFLU_RS04805	0.75	-0.7
1,075,516	+		PFLU_RS04805	0.75	-0.2
1,075,517	-		PFLU_RS04805	0.76	+1.0
1,075,517	-		PFLU_RS04805	0.76	-1.0
1,075,517	-		PFLU_RS04805	0.76	-0.3
1,075,517	-		PFLU_RS04805	0.76	+0.7
1,075,517	-		PFLU_RS04805	0.76	-0.5
1,075,517	-		PFLU_RS04805	0.76	+1.4
1,075,517	-		PFLU_RS04805	0.76	-0.4
1,075,517	-		PFLU_RS04805	0.76	+1.1
1,075,517	-		PFLU_RS04805	0.76	-0.1
1,075,517	-		PFLU_RS04805	0.76	+0.6
1,075,517	-		PFLU_RS04805	0.76	-1.1
1,075,517	-		PFLU_RS04805	0.76	+0.3
1,075,517	-		PFLU_RS04805	0.76	+2.1
1,075,517	-		PFLU_RS04805	0.76	+0.4
1,075,517	-		PFLU_RS04805	0.76	-0.2
1,075,517	-		PFLU_RS04805	0.76	+0.1
1,075,517	-		PFLU_RS04805	0.76	+2.3
1,075,517	-		PFLU_RS04805	0.76	+1.4
1,075,517	-		PFLU_RS04805	0.76	-3.1
1,075,517	-		PFLU_RS04805	0.76	+0.0
1,075,517	-		PFLU_RS04805	0.76	+0.6
1,075,526	-		PFLU_RS04805	0.77	-1.3
1,075,526	-		PFLU_RS04805	0.77	+2.6
1,075,834	+				-3.1
1,075,834	+				-0.5
1,075,834	+				+1.0
1,075,835	-				-0.2
1,075,835	-				+0.0
1,075,886	-				+0.6
1,075,934	+				-2.8
1,075,934	+				-2.5
1,075,935	-				-2.9
1,075,991	+		PFLU_RS04810	0.10	-1.5
1,075,991	+		PFLU_RS04810	0.10	-1.8
1,075,991	+		PFLU_RS04810	0.10	-1.7
1,075,992	-		PFLU_RS04810	0.10	-3.2
1,075,992	-		PFLU_RS04810	0.10	-2.3
1,075,992	-		PFLU_RS04810	0.10	-2.7
1,076,024	+		PFLU_RS04810	0.14	-1.5
1,076,024	+		PFLU_RS04810	0.14	-1.9
1,076,025	-		PFLU_RS04810	0.14	-1.8
1,076,025	-		PFLU_RS04810	0.14	+0.9
1,076,039	+		PFLU_RS04810	0.15	-2.6
1,076,039	+		PFLU_RS04810	0.15	-2.8
1,076,039	+		PFLU_RS04810	0.15	+0.3
1,076,039	+		PFLU_RS04810	0.15	-1.7
1,076,040	-		PFLU_RS04810	0.15	-2.6
1,076,040	-		PFLU_RS04810	0.15	-2.2
1,076,040	-		PFLU_RS04810	0.15	-2.3
1,076,040	-		PFLU_RS04810	0.15	-2.1
1,076,040	-		PFLU_RS04810	0.15	+1.9
1,076,040	-		PFLU_RS04810	0.15	-2.9
1,076,048	+		PFLU_RS04810	0.16	-1.9
1,076,048	+		PFLU_RS04810	0.16	-1.1
1,076,048	+		PFLU_RS04810	0.16	-0.9
1,076,048	+		PFLU_RS04810	0.16	-2.5
1,076,048	+		PFLU_RS04810	0.16	-3.3
1,076,072	+		PFLU_RS04810	0.19	+0.9
1,076,072	+		PFLU_RS04810	0.19	-2.7
1,076,072	+		PFLU_RS04810	0.19	-2.1
1,076,072	+		PFLU_RS04810	0.19	-3.6
1,076,072	+		PFLU_RS04810	0.19	-0.9
1,076,072	+		PFLU_RS04810	0.19	-2.1
1,076,072	+		PFLU_RS04810	0.19	-3.4
1,076,073	-		PFLU_RS04810	0.19	-1.9
1,076,073	-		PFLU_RS04810	0.19	-3.3
1,076,089	+		PFLU_RS04810	0.20	-1.8
1,076,127	-		PFLU_RS04810	0.24	-1.4
1,076,127	-		PFLU_RS04810	0.24	-0.1
1,076,127	-		PFLU_RS04810	0.24	-2.7
1,076,127	-		PFLU_RS04810	0.24	-2.4
1,076,345	+		PFLU_RS04810	0.47	-3.1
1,076,345	+		PFLU_RS04810	0.47	-0.4
1,076,345	+		PFLU_RS04810	0.47	-2.2
1,076,345	+		PFLU_RS04810	0.47	-2.6
1,076,346	-		PFLU_RS04810	0.47	-2.1
1,076,346	-		PFLU_RS04810	0.47	-1.3
1,076,346	-		PFLU_RS04810	0.47	-1.9
1,076,346	-		PFLU_RS04810	0.47	-2.2
1,076,346	-		PFLU_RS04810	0.47	-3.6
1,076,346	-		PFLU_RS04810	0.47	-3.5
1,076,372	+		PFLU_RS04810	0.50	-3.3
1,076,372	+		PFLU_RS04810	0.50	-1.8
1,076,372	+		PFLU_RS04810	0.50	-2.2
1,076,372	+		PFLU_RS04810	0.50	-4.0
1,076,372	+		PFLU_RS04810	0.50	-2.8
1,076,372	+		PFLU_RS04810	0.50	-3.3
1,076,372	+		PFLU_RS04810	0.50	-2.3
1,076,372	+		PFLU_RS04810	0.50	-2.0
1,076,373	-		PFLU_RS04810	0.50	-2.6
1,076,373	-		PFLU_RS04810	0.50	-3.0
1,076,373	-		PFLU_RS04810	0.50	-0.1
1,076,373	-		PFLU_RS04810	0.50	-3.4
1,076,373	-		PFLU_RS04810	0.50	-2.5
1,076,373	-		PFLU_RS04810	0.50	-3.4
1,076,373	-		PFLU_RS04810	0.50	-3.0
1,076,444	+		PFLU_RS04810	0.57	-3.0
1,076,636	+		PFLU_RS04810	0.77	-3.1
1,076,637	-		PFLU_RS04810	0.77	-1.5
1,076,666	+		PFLU_RS04810	0.80	-2.8
1,076,666	+		PFLU_RS04810	0.80	-2.4
1,076,666	+		PFLU_RS04810	0.80	-4.3
1,076,667	-		PFLU_RS04810	0.80	-2.9
1,076,667	-		PFLU_RS04810	0.80	-2.5
1,076,667	-		PFLU_RS04810	0.80	-2.5
1,076,667	-		PFLU_RS04810	0.80	-1.5
1,076,778	+				+0.3
1,076,879	+				-2.7
1,076,919	+				+0.8
1,076,919	+				+1.9
1,076,919	+				+0.3
1,076,920	-				+2.3
1,076,920	-				+4.1
1,076,930	+				+3.0
1,076,945	-				+4.2
1,076,971	+				+1.2
1,076,971	+				+0.8
1,076,971	+				-0.3
1,076,994	-				+2.5
1,077,091	+				-0.9
1,077,237	+		PFLU_RS04815	0.13	+0.9
1,077,237	+		PFLU_RS04815	0.13	+1.3
1,077,237	+		PFLU_RS04815	0.13	+1.2
1,077,238	-		PFLU_RS04815	0.13	+1.5
1,077,238	-		PFLU_RS04815	0.13	+0.8
1,077,238	-		PFLU_RS04815	0.13	+0.2
1,077,420	+		PFLU_RS04815	0.25	+0.0
1,077,420	+		PFLU_RS04815	0.25	-0.5
1,077,420	+		PFLU_RS04815	0.25	-0.3
1,077,420	+		PFLU_RS04815	0.25	+0.6
1,077,420	+		PFLU_RS04815	0.25	+0.5
1,077,420	+		PFLU_RS04815	0.25	-0.4
1,077,421	-		PFLU_RS04815	0.25	+1.3
1,077,421	-		PFLU_RS04815	0.25	+2.1
1,077,421	-		PFLU_RS04815	0.25	+0.7
1,077,421	-		PFLU_RS04815	0.25	-0.4
1,077,421	-		PFLU_RS04815	0.25	+1.5
1,077,483	+		PFLU_RS04815	0.29	+0.9
1,077,483	+		PFLU_RS04815	0.29	+1.3
1,077,483	+		PFLU_RS04815	0.29	+0.8
1,077,483	+		PFLU_RS04815	0.29	-1.0
1,077,483	+		PFLU_RS04815	0.29	+1.3
1,077,483	+		PFLU_RS04815	0.29	+0.3
1,077,483	+		PFLU_RS04815	0.29	+1.2
1,077,483	+		PFLU_RS04815	0.29	+0.6
1,077,484	-		PFLU_RS04815	0.29	-0.7
1,077,484	-		PFLU_RS04815	0.29	+0.9
1,077,484	-		PFLU_RS04815	0.29	+1.7
1,077,484	-		PFLU_RS04815	0.29	-0.9
1,077,484	-		PFLU_RS04815	0.29	+1.0
1,077,484	-		PFLU_RS04815	0.29	+0.7
1,077,484	-		PFLU_RS04815	0.29	+1.3
1,077,484	-		PFLU_RS04815	0.29	+1.1
1,077,484	-		PFLU_RS04815	0.29	+1.7
1,077,484	-		PFLU_RS04815	0.29	+1.2
1,077,484	-		PFLU_RS04815	0.29	-0.4
1,077,606	+		PFLU_RS04815	0.37	-0.3
1,077,606	+		PFLU_RS04815	0.37	+4.2
1,077,606	+		PFLU_RS04815	0.37	+0.5
1,077,606	+		PFLU_RS04815	0.37	+0.2
1,077,606	+		PFLU_RS04815	0.37	+2.9
1,077,606	+		PFLU_RS04815	0.37	+2.2
1,077,606	+		PFLU_RS04815	0.37	+1.5
1,077,606	+		PFLU_RS04815	0.37	+0.7
1,077,606	+		PFLU_RS04815	0.37	+0.0
1,077,607	-		PFLU_RS04815	0.37	-0.3
1,077,607	-		PFLU_RS04815	0.37	+0.7
1,077,628	-		PFLU_RS04815	0.39	-0.7
1,077,628	-		PFLU_RS04815	0.39	+0.5
1,077,693	-		PFLU_RS04815	0.43	-0.5