Experiment: syringaldehyde 3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0452 and Psest_0453 overlap by 1 nucleotides Psest_0453 and Psest_0454 are separated by 43 nucleotides Psest_0454 and Psest_0455 are separated by 8 nucleotides
Psest_0452: Psest_0452 - lipopolysaccharide heptosyltransferase I, at 498,209 to 499,210
_0452
Psest_0453: Psest_0453 - Glycosyltransferase, at 499,210 to 500,331
_0453
Psest_0454: Psest_0454 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 500,375 to 501,181
_0454
Psest_0455: Psest_0455 - ADP-heptose:LPS heptosyltransferase, at 501,190 to 502,146
_0455
Position (kb)
499
500
501 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 500.374 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.236 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.251 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.253 kb on + strand at 501.272 kb on + strand at 501.272 kb on + strand at 501.309 kb on + strand, within Psest_0455 at 501.309 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455 at 501.318 kb on + strand, within Psest_0455
Per-strain Table
Position Strand Gene LocusTag Fraction syringaldehyde 3 mM remove 500,374 + -0.7 501,236 + -0.4 501,236 + -0.1 501,236 + -0.5 501,236 + -2.8 501,251 + -1.8 501,251 + -0.5 501,251 + -1.3 501,251 + -0.8 501,251 + -0.3 501,251 + +0.7 501,251 + -0.6 501,253 + +0.6 501,253 + -1.6 501,253 + +2.3 501,253 + +1.5 501,253 + -0.9 501,253 + +1.8 501,253 + +0.1 501,253 + -1.4 501,253 + +0.0 501,253 + +0.9 501,253 + +0.2 501,253 + +1.4 501,253 + +1.3 501,272 + -0.7 501,272 + -2.3 501,309 + Psest_0455 0.12 -1.8 501,309 + Psest_0455 0.12 -1.1 501,318 + Psest_0455 0.13 +0.2 501,318 + Psest_0455 0.13 +1.8
Or see this region's nucleotide sequence