Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4252

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
4,438,195	+		Psest_4251	0.66	-0.4
4,438,195	+		Psest_4251	0.66	+0.3
4,438,195	+		Psest_4251	0.66	-1.5
4,438,196	-		Psest_4251	0.66	-0.4
4,438,246	+		Psest_4251	0.67	-2.1
4,438,247	-		Psest_4251	0.67	+1.4
4,438,501	+		Psest_4251	0.76	+0.5
4,438,501	+		Psest_4251	0.76	+2.2
4,438,502	-		Psest_4251	0.76	+0.9
4,438,587	+		Psest_4251	0.79	+1.8
4,438,607	+		Psest_4251	0.80	+0.4
4,438,629	+		Psest_4251	0.81	-1.3
4,438,629	+		Psest_4251	0.81	-1.4
4,438,630	-		Psest_4251	0.81	-0.4
4,438,630	-		Psest_4251	0.81	+1.4
4,438,686	-		Psest_4251	0.83	-2.7
4,438,868	+		Psest_4251	0.89	-0.7
4,438,886	+		Psest_4251	0.90	-1.3
4,438,915	+				+0.4
4,438,915	+				+2.0
4,438,915	+				-2.5
4,438,915	+				+1.4
4,438,915	+				-1.6
4,438,915	+				+0.8
4,438,915	+				-0.8
4,438,916	-				+0.8
4,438,916	-				-0.1
4,438,916	-				-0.5
4,438,920	-				+0.8
4,438,920	-				-0.3
4,438,920	-				-0.4
4,438,939	+				-0.1
4,438,939	+				+0.5
4,438,940	-				-0.1
4,438,988	+				+0.8
4,438,988	+				-2.9
4,438,989	-				+1.7
4,438,989	-				-0.1
4,438,989	-				-0.8
4,439,026	+				+1.4
4,439,027	-				+0.2
4,439,038	-				+0.7
4,439,093	+				+0.7
4,439,099	-				+1.7
4,439,099	-				-1.0
4,439,102	+				-2.4
4,439,103	-				+0.2
4,439,109	+				-0.1
4,439,110	-				-2.0
4,439,128	+				-0.2
4,439,170	+				-2.4
4,439,170	+				-0.7
4,439,182	-				+1.1
4,439,192	+				-1.1
4,439,244	+		Psest_4252	0.17	+2.2
4,439,301	+		Psest_4252	0.31	+0.2
4,439,339	-		Psest_4252	0.40	+0.9
4,439,390	+		Psest_4252	0.53	+1.0
4,439,401	+		Psest_4252	0.55	+1.3
4,439,402	-		Psest_4252	0.56	+0.2
4,439,402	-		Psest_4252	0.56	+0.4
4,439,480	+		Psest_4252	0.75	+1.5
4,439,554	+				+0.1
4,439,579	+				+0.5
4,439,579	+				-0.2
4,439,579	+				+0.7
4,439,579	+				+0.1
4,439,579	+				+0.7
4,439,579	+				+0.4
4,439,579	+				-0.2
4,439,580	-				-0.1
4,439,589	-				-0.6
4,439,606	+				-0.5
4,439,606	+				-0.1
4,439,606	+				-0.3
4,439,606	+				-0.5
4,439,607	-				-0.7
4,439,626	-				+1.9
4,439,630	+				+2.1
4,439,630	+				-0.6
4,439,653	+				-0.9
4,439,734	-				+0.6
4,439,734	-				-3.5
4,439,744	-				+0.1
4,439,744	-				-1.8
4,439,818	-				-0.5
4,439,818	-				-1.3
4,439,818	-				-0.5
4,439,818	-				-0.6
4,439,847	+				+0.8
4,439,871	+				-1.1
4,439,871	+				-1.5
4,439,872	-				-0.6
4,439,872	-				+0.2
4,439,907	+				+0.5
4,439,907	+				-1.0
4,439,908	-				-0.1
4,439,910	+				+0.7
4,439,910	+				+1.0
4,439,910	+				-0.1
4,439,910	+				-0.1
4,439,910	+				-1.2
4,439,911	-				+0.2
4,439,911	-				+2.2
4,439,911	-				+1.6
4,439,911	-				+0.1
4,439,911	-				-0.8
4,439,911	-				+3.3
4,439,911	-				+1.1
4,439,911	-				+0.2
4,439,913	+				-1.2
4,439,913	+				-0.5
4,439,913	+				-1.9
4,439,913	+				+0.1
4,439,913	+				+0.9
4,439,913	+				-0.3
4,439,913	+				-0.6
4,439,913	+				-0.1
4,439,914	-				+0.5
4,439,914	-				+0.1
4,439,914	-				-0.1
4,439,914	-				+1.8
4,439,949	+		Psest_4253	0.11	-0.2
4,440,010	-		Psest_4253	0.14	-0.3
4,440,123	+		Psest_4253	0.20	+0.6
4,440,288	+		Psest_4253	0.29	+1.4
4,440,288	+		Psest_4253	0.29	+2.2
4,440,288	+		Psest_4253	0.29	-0.6
4,440,288	+		Psest_4253	0.29	+0.6
4,440,288	+		Psest_4253	0.29	-2.7
4,440,288	+		Psest_4253	0.29	+0.1
4,440,288	+		Psest_4253	0.29	-0.6
4,440,288	+		Psest_4253	0.29	-0.9
4,440,288	+		Psest_4253	0.29	+0.2
4,440,289	-		Psest_4253	0.29	-0.9
4,440,289	-		Psest_4253	0.29	-1.8
4,440,289	-		Psest_4253	0.29	+0.8
4,440,289	-		Psest_4253	0.29	-2.7
4,440,291	+		Psest_4253	0.29	-0.2
4,440,291	+		Psest_4253	0.29	-0.5
4,440,291	+		Psest_4253	0.29	-1.0
4,440,291	+		Psest_4253	0.29	+0.0
4,440,292	-		Psest_4253	0.29	+1.0
4,440,292	-		Psest_4253	0.29	+0.4
4,440,292	-		Psest_4253	0.29	-0.4
4,440,343	-		Psest_4253	0.32	-2.5
4,440,411	+		Psest_4253	0.35	+0.3
4,440,411	+		Psest_4253	0.35	-0.4
4,440,412	-		Psest_4253	0.35	-1.2
4,440,412	-		Psest_4253	0.35	+2.4
4,440,412	-		Psest_4253	0.35	+1.6
4,440,412	-		Psest_4253	0.35	-0.8
4,440,522	+		Psest_4253	0.41	-0.9
4,440,550	-		Psest_4253	0.43	-0.8