Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3684

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
3,848,476	+				+1.1
3,848,703	+				+0.7
3,848,781	+				-0.4
3,848,795	-				+0.8
3,848,873	-				-0.6
3,848,873	-				-0.6
3,849,030	-		Psest_3684	0.13	+0.8
3,849,087	-		Psest_3684	0.16	-0.8
3,849,167	+		Psest_3684	0.20	-0.7
3,849,167	+		Psest_3684	0.20	+0.1
3,849,168	-		Psest_3684	0.20	+0.8
3,849,168	-		Psest_3684	0.20	-1.3
3,849,238	-		Psest_3684	0.24	-0.1
3,849,238	-		Psest_3684	0.24	+1.2
3,849,387	+		Psest_3684	0.32	+0.2
3,849,387	+		Psest_3684	0.32	+1.4
3,849,388	-		Psest_3684	0.33	+2.2
3,849,652	+		Psest_3684	0.47	+0.2
3,849,652	+		Psest_3684	0.47	-0.9
3,849,774	+		Psest_3684	0.54	+1.2
3,849,775	-		Psest_3684	0.54	+0.4
3,850,137	+		Psest_3684	0.74	-1.3
3,850,137	+		Psest_3684	0.74	+1.2
3,850,137	+		Psest_3684	0.74	+0.3
3,850,137	+		Psest_3684	0.74	-0.8
3,850,137	+		Psest_3684	0.74	+0.8
3,850,137	+		Psest_3684	0.74	-0.8
3,850,137	+		Psest_3684	0.74	+2.0
3,850,138	-		Psest_3684	0.74	+0.1
3,850,138	-		Psest_3684	0.74	-0.6
3,850,138	-		Psest_3684	0.74	-0.3
3,850,138	-		Psest_3684	0.74	+0.5
3,850,138	-		Psest_3684	0.74	-1.9
3,850,140	-		Psest_3684	0.75	+0.1
3,850,140	-		Psest_3684	0.75	-0.6
3,850,140	-		Psest_3684	0.75	-3.2
3,850,140	-		Psest_3684	0.75	+0.2
3,850,240	+		Psest_3684	0.80	+1.6
3,850,291	-		Psest_3684	0.83	-0.0
3,850,291	-		Psest_3684	0.83	+1.3
3,850,379	+		Psest_3684	0.88	-1.2
3,850,380	-		Psest_3684	0.88	-0.8
3,850,380	-		Psest_3684	0.88	-1.8
3,850,476	+				-0.1
3,850,476	+				-1.0
3,850,476	+				-1.1
3,850,476	+				-2.3
3,850,476	+				-1.2
3,850,477	-				-0.9
3,850,477	-				+0.2
3,850,478	+				-0.3
3,850,762	+				-1.3
3,850,762	+				+0.2
3,850,762	+				-0.7
3,850,763	-				-0.6
3,850,777	+				+1.0
3,850,777	+				-0.3
3,850,778	-				-0.8
3,850,778	-				-0.3
3,850,778	-				-0.1
3,850,778	-				-0.5
3,850,840	+		Psest_3685	0.12	-0.1
3,850,840	+		Psest_3685	0.12	+1.0
3,850,840	+		Psest_3685	0.12	-2.6
3,850,840	+		Psest_3685	0.12	-2.0
3,850,840	+		Psest_3685	0.12	+0.6
3,850,840	+		Psest_3685	0.12	+1.1
3,850,840	+		Psest_3685	0.12	-0.4
3,850,840	+		Psest_3685	0.12	-0.7
3,850,840	+		Psest_3685	0.12	+0.6
3,850,840	+		Psest_3685	0.12	+1.2
3,850,840	+		Psest_3685	0.12	-0.5
3,850,840	+		Psest_3685	0.12	-2.7
3,850,840	+		Psest_3685	0.12	-0.2
3,850,840	+		Psest_3685	0.12	-1.0
3,850,840	+		Psest_3685	0.12	-0.8
3,850,840	+		Psest_3685	0.12	+0.0
3,850,840	+		Psest_3685	0.12	+0.2
3,850,840	+		Psest_3685	0.12	+0.2
3,850,840	+		Psest_3685	0.12	+0.4
3,850,840	+		Psest_3685	0.12	+0.0
3,850,840	+		Psest_3685	0.12	+1.7
3,850,840	+		Psest_3685	0.12	-1.7
3,850,840	+		Psest_3685	0.12	-0.1
3,850,841	-		Psest_3685	0.12	-0.6
3,850,841	-		Psest_3685	0.12	-1.3
3,850,841	-		Psest_3685	0.12	-0.6
3,850,841	-		Psest_3685	0.12	-0.6
3,850,841	-		Psest_3685	0.12	+0.9
3,850,841	-		Psest_3685	0.12	+1.5
3,850,841	-		Psest_3685	0.12	-1.0
3,850,841	-		Psest_3685	0.12	+0.0
3,850,841	-		Psest_3685	0.12	+1.1
3,850,841	-		Psest_3685	0.12	+0.9
3,850,841	-		Psest_3685	0.12	-0.7
3,850,841	-		Psest_3685	0.12	+0.9
3,850,841	-		Psest_3685	0.12	+0.7
3,850,842	+		Psest_3685	0.12	+1.7
3,850,842	+		Psest_3685	0.12	-0.2
3,850,842	+		Psest_3685	0.12	-0.8
3,850,948	+		Psest_3685	0.20	+0.5
3,850,948	+		Psest_3685	0.20	+1.1
3,850,948	+		Psest_3685	0.20	+0.3
3,850,948	+		Psest_3685	0.20	-0.5
3,850,948	+		Psest_3685	0.20	+2.0
3,850,949	-		Psest_3685	0.21	-0.7
3,850,949	-		Psest_3685	0.21	-0.2
3,850,949	-		Psest_3685	0.21	+0.8
3,850,949	-		Psest_3685	0.21	+2.1
3,850,949	-		Psest_3685	0.21	-1.3
3,850,949	-		Psest_3685	0.21	+1.2
3,850,949	-		Psest_3685	0.21	-1.3
3,850,949	-		Psest_3685	0.21	-0.8
3,850,949	-		Psest_3685	0.21	-0.5
3,850,983	+		Psest_3685	0.23	-0.9
3,850,984	-		Psest_3685	0.23	-0.1
3,850,984	-		Psest_3685	0.23	+0.4
3,850,984	-		Psest_3685	0.23	-0.0
3,851,006	-		Psest_3685	0.25	-1.2
3,851,017	+		Psest_3685	0.26	-0.9
3,851,017	+		Psest_3685	0.26	+0.6
3,851,017	+		Psest_3685	0.26	+0.3
3,851,017	+		Psest_3685	0.26	+1.6
3,851,017	+		Psest_3685	0.26	-1.3
3,851,017	+		Psest_3685	0.26	-0.6
3,851,017	+		Psest_3685	0.26	-0.6
3,851,017	+		Psest_3685	0.26	+1.1
3,851,017	+		Psest_3685	0.26	+0.1
3,851,018	-		Psest_3685	0.26	+0.7
3,851,018	-		Psest_3685	0.26	+0.8
3,851,018	-		Psest_3685	0.26	-0.3
3,851,018	-		Psest_3685	0.26	+0.4
3,851,299	+		Psest_3685	0.48	+0.8
3,851,299	+		Psest_3685	0.48	-0.0
3,851,299	+		Psest_3685	0.48	-0.1
3,851,299	+		Psest_3685	0.48	+0.6
3,851,299	+		Psest_3685	0.48	+1.6
3,851,299	+		Psest_3685	0.48	+0.4
3,851,300	-		Psest_3685	0.48	+1.3
3,851,300	-		Psest_3685	0.48	-1.4
3,851,300	-		Psest_3685	0.48	+2.0
3,851,300	-		Psest_3685	0.48	-1.0
3,851,300	-		Psest_3685	0.48	+0.9
3,851,300	-		Psest_3685	0.48	+0.0
3,851,425	+		Psest_3685	0.58	+1.4
3,851,425	+		Psest_3685	0.58	+0.5
3,851,426	-		Psest_3685	0.58	-0.1