Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3451

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
3,622,034	+		Psest_3450	0.68	+0.7
3,622,053	+		Psest_3450	0.70	+1.6
3,622,053	+		Psest_3450	0.70	-1.9
3,622,053	+		Psest_3450	0.70	-1.1
3,622,054	-		Psest_3450	0.70	-0.4
3,622,054	-		Psest_3450	0.70	-1.1
3,622,054	-		Psest_3450	0.70	-1.7
3,622,054	-		Psest_3450	0.70	-0.0
3,622,054	-		Psest_3450	0.70	+0.6
3,622,054	-		Psest_3450	0.70	-1.2
3,622,054	-		Psest_3450	0.70	+0.3
3,622,536	-				+0.4
3,622,536	-				+0.3
3,622,536	-				-1.2
3,622,541	+				-1.2
3,622,542	-				+0.2
3,622,542	-				-1.5
3,622,542	-				+0.3
3,622,562	-				+0.9
3,622,594	+				+0.4
3,622,594	+				-1.5
3,622,594	+				+1.3
3,622,594	+				-0.9
3,622,594	+				+1.6
3,622,594	+				-0.8
3,622,594	+				+0.7
3,622,594	+				-0.4
3,622,595	-				-0.9
3,622,595	-				-0.4
3,622,595	-				-0.6
3,622,595	-				-0.6
3,622,595	-				+0.3
3,622,595	-				-0.2
3,622,595	-				+0.8
3,622,595	-				-1.2
3,622,618	-				-0.5
3,623,139	-		Psest_3451	0.47	+0.5
3,623,139	-		Psest_3451	0.47	-0.5
3,623,292	-		Psest_3451	0.61	+0.9
3,623,292	-		Psest_3451	0.61	-2.1
3,623,292	-		Psest_3451	0.61	+1.0
3,623,511	-		Psest_3451	0.80	+2.6
3,623,511	-		Psest_3451	0.80	+1.2
3,623,511	-		Psest_3451	0.80	+0.4
3,623,511	-		Psest_3451	0.80	+0.2
3,623,600	+		Psest_3451	0.88	-0.4
3,623,600	+		Psest_3451	0.88	+0.8
3,623,600	+		Psest_3451	0.88	-0.1
3,623,601	-		Psest_3451	0.88	-0.4
3,623,601	-		Psest_3451	0.88	+1.5
3,623,601	-		Psest_3451	0.88	+0.8
3,623,601	-		Psest_3451	0.88	-0.2
3,623,601	-		Psest_3451	0.88	+2.0
3,623,601	-		Psest_3451	0.88	+0.3
3,623,601	-		Psest_3451	0.88	+0.1
3,623,601	-		Psest_3451	0.88	+1.7
3,623,808	+				-0.3
3,623,808	+				+1.0
3,623,809	-				+1.2
3,623,809	-				+1.0
3,623,836	+				-0.5
3,623,836	+				-1.3
3,623,837	-				-0.1
3,623,837	-				-1.6
3,623,929	+				-0.2
3,623,929	+				-0.9
3,623,929	+				-2.4
3,623,929	+				-2.2
3,623,929	+				+0.6
3,623,929	+				+0.2
3,623,929	+				-0.5
3,623,929	+				-1.1
3,623,929	+				+0.5
3,623,929	+				+0.3
3,623,929	+				-0.0
3,623,930	-				+0.5
3,623,930	-				-0.6
3,623,930	-				-1.4
3,623,930	-				-0.7
3,623,968	+		Psest_3452	0.11	-0.6
3,623,969	-		Psest_3452	0.11	+0.4
3,623,969	-		Psest_3452	0.11	-0.7
3,624,067	+		Psest_3452	0.18	+0.9
3,624,139	+		Psest_3452	0.24	-0.1
3,624,140	-		Psest_3452	0.24	+0.2
3,624,140	-		Psest_3452	0.24	-1.3
3,624,140	-		Psest_3452	0.24	-0.4
3,624,305	-		Psest_3452	0.36	-1.4
3,624,305	-		Psest_3452	0.36	-1.1
3,624,305	-		Psest_3452	0.36	+1.7
3,624,305	-		Psest_3452	0.36	-0.6
3,624,305	-		Psest_3452	0.36	-1.1
3,624,520	+		Psest_3452	0.52	-0.9
3,624,521	-		Psest_3452	0.52	+0.0