Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3227

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
3,397,877	-				-1.1
3,398,004	+				-0.1
3,398,004	+				+0.0
3,398,004	+				+1.5
3,398,004	+				+0.4
3,398,004	+				+0.7
3,398,004	+				+2.3
3,398,004	+				-0.5
3,398,004	+				-1.4
3,398,004	+				-1.0
3,398,004	+				-0.4
3,398,005	-				-0.0
3,398,005	-				+1.1
3,398,005	-				+1.8
3,398,005	-				+0.3
3,398,005	-				+0.6
3,398,005	-				-0.9
3,398,005	-				+0.4
3,398,005	-				-1.2
3,398,005	-				+1.1
3,398,005	-				+1.2
3,398,087	+				+0.1
3,398,087	+				+0.0
3,398,087	+				+0.5
3,398,087	+				-0.9
3,398,087	+				-0.9
3,398,087	+				-1.2
3,398,087	+				-2.5
3,398,087	+				-0.2
3,398,088	-				-0.6
3,398,088	-				+0.3
3,398,088	-				-1.7
3,398,088	-				+1.7
3,398,088	-				+1.1
3,398,088	-				+2.3
3,398,088	-				+0.2
3,398,088	-				-1.8
3,398,088	-				-0.9
3,398,088	-				+1.5
3,398,088	-				-1.0
3,398,144	+				-0.8
3,398,183	+				-0.2
3,398,183	+				+0.0
3,398,183	+				+0.0
3,398,184	-				-1.2
3,398,278	-		Psest_3226	0.20	-0.3
3,398,781	-				+0.3
3,398,869	+				+2.1
3,398,927	+		Psest_3227	0.22	-0.7
3,398,927	+		Psest_3227	0.22	-1.2
3,398,927	+		Psest_3227	0.22	-1.3
3,398,927	+		Psest_3227	0.22	+0.2
3,398,928	-		Psest_3227	0.22	+1.2
3,398,928	-		Psest_3227	0.22	+0.4
3,398,928	-		Psest_3227	0.22	+0.0
3,398,928	-		Psest_3227	0.22	-0.4
3,398,928	-		Psest_3227	0.22	-1.0
3,398,928	-		Psest_3227	0.22	-1.2
3,399,005	-		Psest_3227	0.39	-1.2
3,399,067	+		Psest_3227	0.53	-0.9
3,399,068	-		Psest_3227	0.53	+0.3
3,399,068	-		Psest_3227	0.53	+0.1
3,399,527	+		Psest_3228	0.28	-2.2
3,399,548	-		Psest_3228	0.31	-2.1
3,399,631	+		Psest_3228	0.41	-0.1
3,399,631	+		Psest_3228	0.41	-2.4
3,399,631	+		Psest_3228	0.41	-0.1
3,399,632	-		Psest_3228	0.41	-3.2
3,399,632	-		Psest_3228	0.41	-1.2
3,399,632	-		Psest_3228	0.41	+0.2
3,399,745	+		Psest_3228	0.55	-0.8
3,399,745	+		Psest_3228	0.55	-2.8
3,399,745	+		Psest_3228	0.55	-3.3
3,399,746	-		Psest_3228	0.55	-1.6
3,399,964	+		Psest_3228	0.81	-4.1
3,399,964	+		Psest_3228	0.81	-3.3
3,399,964	+		Psest_3228	0.81	-0.1
3,399,964	+		Psest_3228	0.81	+0.6
3,399,964	+		Psest_3228	0.81	-0.4
3,399,964	+		Psest_3228	0.81	-2.1
3,399,964	+		Psest_3228	0.81	-1.9
3,399,964	+		Psest_3228	0.81	-2.3
3,399,964	+		Psest_3228	0.81	-2.2
3,399,964	+		Psest_3228	0.81	-0.2
3,399,964	+		Psest_3228	0.81	-1.1
3,399,964	+		Psest_3228	0.81	-1.4
3,399,964	+		Psest_3228	0.81	-1.9
3,399,965	-		Psest_3228	0.82	+1.8
3,399,965	-		Psest_3228	0.82	-2.0
3,399,965	-		Psest_3228	0.82	-0.5
3,399,965	-		Psest_3228	0.82	-1.9
3,399,965	-		Psest_3228	0.82	-1.5
3,399,965	-		Psest_3228	0.82	-2.9
3,399,965	-		Psest_3228	0.82	-0.8
3,399,965	-		Psest_3228	0.82	-2.0
3,400,006	+		Psest_3228	0.87	-1.7
3,400,006	+		Psest_3228	0.87	+0.0
3,400,007	+		Psest_3228	0.87	-3.6
3,400,007	-		Psest_3228	0.87	-0.9
3,400,007	-		Psest_3228	0.87	-1.6
3,400,007	-		Psest_3228	0.87	+0.9
3,400,007	-		Psest_3228	0.87	-2.3
3,400,007	-		Psest_3228	0.87	-2.8
3,400,007	-		Psest_3228	0.87	-2.4
3,400,007	-		Psest_3228	0.87	-1.6
3,400,007	-		Psest_3228	0.87	-2.6
3,400,007	-		Psest_3228	0.87	-0.4
3,400,007	-		Psest_3228	0.87	-0.1
3,400,007	-		Psest_3228	0.87	-1.0
3,400,007	-		Psest_3228	0.87	-0.4
3,400,007	-		Psest_3228	0.87	-2.3
3,400,007	-		Psest_3228	0.87	-3.9
3,400,007	-		Psest_3228	0.87	-0.8
3,400,007	-		Psest_3228	0.87	-0.9
3,400,148	-				-1.9
3,400,187	+				+0.3
3,400,187	+				-0.3
3,400,187	+				+0.1
3,400,187	+				+0.3
3,400,187	+				+0.4
3,400,187	+				-1.1
3,400,188	-				+1.5
3,400,188	-				+1.5
3,400,188	-				+0.5
3,400,188	-				+1.2
3,400,238	+				-1.5
3,400,238	+				+1.5
3,400,238	+				+0.7
3,400,239	-				-0.4
3,400,239	-				-2.1
3,400,239	-				-0.8
3,400,239	-				+1.6
3,400,239	-				+1.5
3,400,239	-				-0.5