Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2093

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
2,219,480	-		Psest_2091	0.46	+0.9
2,219,656	+		Psest_2091	0.79	+0.2
2,219,656	+		Psest_2091	0.79	-0.3
2,219,657	-		Psest_2091	0.79	+1.4
2,219,663	-		Psest_2091	0.80	+1.0
2,219,738	-				+0.1
2,219,864	-				+1.7
2,219,864	-				+1.0
2,219,994	-		Psest_2092	0.18	+1.5
2,220,034	+		Psest_2092	0.27	-0.5
2,220,034	+		Psest_2092	0.27	+0.3
2,220,126	-		Psest_2092	0.48	+0.4
2,220,148	+		Psest_2092	0.53	+0.9
2,220,149	-		Psest_2092	0.53	+0.2
2,220,200	-		Psest_2092	0.64	+0.2
2,220,208	+		Psest_2092	0.66	-0.5
2,220,343	+				-0.2
2,220,343	+				+1.3
2,220,343	+				+0.7
2,220,343	+				+0.1
2,220,344	-				-0.4
2,220,344	-				-0.7
2,220,344	-				-0.1
2,220,344	-				+0.9
2,220,464	+				-0.5
2,220,464	+				-1.0
2,220,464	+				-0.0
2,220,464	+				-2.5
2,220,666	+		Psest_2093	0.21	-0.7
2,220,760	+		Psest_2093	0.28	-0.6
2,220,760	+		Psest_2093	0.28	-0.8
2,220,760	+		Psest_2093	0.28	+0.5
2,220,760	+		Psest_2093	0.28	+0.1
2,220,760	+		Psest_2093	0.28	+1.5
2,220,761	-		Psest_2093	0.28	-0.6
2,220,761	-		Psest_2093	0.28	-1.8
2,220,761	-		Psest_2093	0.28	-2.5
2,220,761	-		Psest_2093	0.28	+0.5
2,221,038	+		Psest_2093	0.50	-0.0
2,221,355	+		Psest_2093	0.74	-0.8
2,221,355	+		Psest_2093	0.74	-1.0
2,221,583	+				+0.3
2,221,584	-				+0.5
2,221,691	+				-0.6
2,221,691	+				-0.7
2,221,691	+				+0.8
2,221,691	+				+0.5
2,221,691	+				+0.1
2,221,691	+				+0.6
2,221,691	+				+0.4
2,221,691	+				-1.7
2,221,691	+				+1.7
2,221,691	+				+1.3
2,221,692	-				-1.3
2,221,692	-				-0.1
2,221,692	-				-0.3
2,221,692	-				+0.8
2,221,692	-				+0.4
2,221,696	+				-0.5
2,221,696	+				-0.3
2,221,696	+				-1.5
2,221,696	+				-1.1
2,221,696	+				-0.5
2,221,696	+				+0.0
2,221,696	+				-0.5
2,221,696	+				+0.3
2,221,696	+				+0.6
2,221,696	+				-0.0
2,221,696	+				+0.4
2,221,696	+				+0.2
2,221,696	+				+0.2
2,221,696	+				-0.0
2,221,696	+				-0.0
2,221,696	+				-2.0
2,221,696	+				-0.5
2,221,696	+				-0.3
2,221,696	+				-1.0
2,221,696	+				+0.6
2,221,696	+				+1.5
2,221,696	+				+0.7
2,221,696	+				-1.0
2,221,696	+				-0.3
2,221,697	-				+0.5
2,221,697	-				+1.5
2,221,697	-				+0.5
2,221,697	-				-1.8
2,221,697	-				+0.1
2,221,697	-				-0.7
2,221,697	-				+1.2
2,221,697	-				-0.4
2,221,697	-				+0.2
2,221,697	-				+1.5
2,221,697	-				+1.5
2,221,697	-				+1.3
2,221,697	-				-0.5
2,221,697	-				+0.8
2,221,697	-				-1.6
2,221,726	+				-1.8
2,221,726	+				-1.6
2,221,727	-				+1.2
2,221,752	+				-0.9
2,221,920	-		Psest_2094	0.13	-0.9
2,221,986	-		Psest_2094	0.19	+1.0
2,221,986	-		Psest_2094	0.19	+1.3
2,222,010	-		Psest_2094	0.22	-0.3
2,222,010	-		Psest_2094	0.22	+0.8
2,222,087	+		Psest_2094	0.29	+0.3
2,222,458	+		Psest_2094	0.65	-0.6
2,222,458	+		Psest_2094	0.65	+0.9
2,222,458	+		Psest_2094	0.65	+1.1
2,222,458	+		Psest_2094	0.65	-0.3
2,222,458	+		Psest_2094	0.65	+0.6
2,222,459	-		Psest_2094	0.65	-0.3
2,222,459	-		Psest_2094	0.65	-0.8
2,222,459	-		Psest_2094	0.65	-0.2