Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1348

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,458,440	-				+2.4
1,458,455	+				-0.6
1,458,513	+				+0.4
1,458,513	+				-1.7
1,458,514	-				-1.6
1,458,514	-				+0.6
1,458,514	-				-1.4
1,458,514	-				+1.4
1,458,514	-				+0.4
1,458,514	-				+1.3
1,458,514	-				-1.4
1,458,514	-				+0.4
1,458,588	+				+0.4
1,458,589	-				-1.5
1,458,591	+				+1.1
1,458,592	-				+0.2
1,458,592	-				+0.6
1,458,592	-				-0.2
1,458,867	+				-2.0
1,458,867	+				+1.1
1,458,867	+				-0.7
1,458,867	+				-1.7
1,458,867	+				+0.8
1,458,867	+				+0.6
1,458,867	+				+0.3
1,458,867	+				+1.0
1,458,867	+				-2.8
1,458,867	+				+0.3
1,458,867	+				-0.8
1,458,867	+				-1.3
1,458,867	+				-0.0
1,458,867	+				-0.9
1,458,867	+				-0.0
1,458,867	+				+0.9
1,458,868	-				+0.8
1,458,868	-				-0.2
1,458,868	-				-2.3
1,458,868	-				-0.5
1,458,868	-				-1.4
1,458,868	-				+0.1
1,458,868	-				+1.9
1,458,868	-				+0.5
1,458,868	-				-1.5
1,458,868	-				-0.2
1,458,868	-				-0.5
1,458,868	-				+0.0
1,458,868	-				-0.6
1,458,868	-				-1.0
1,458,868	-				+1.6
1,458,868	-				-1.4
1,458,868	-				+0.0
1,458,868	-				-0.2
1,458,870	+				-1.4
1,458,870	+				-0.5
1,458,870	+				-0.8
1,458,870	+				-0.8
1,458,870	+				+0.8
1,458,870	+				+0.1
1,458,871	-				+2.3
1,458,871	-				+0.6
1,458,871	-				+0.6
1,458,871	-				-1.0
1,458,871	-				+0.8
1,458,871	-				-0.2
1,458,871	-				+1.2
1,459,062	+		Psest_1348	0.25	-0.6
1,459,062	+		Psest_1348	0.25	-1.4
1,459,062	+		Psest_1348	0.25	-1.0
1,459,062	+		Psest_1348	0.25	+0.6
1,459,062	+		Psest_1348	0.25	-0.4
1,459,062	+		Psest_1348	0.25	+0.3
1,459,063	-		Psest_1348	0.25	-0.7
1,459,063	-		Psest_1348	0.25	+0.5
1,459,129	+		Psest_1348	0.33	-1.4
1,459,130	-		Psest_1348	0.33	-2.5
1,459,180	-		Psest_1348	0.39	+2.3
1,459,200	+		Psest_1348	0.41	+2.3
1,459,285	-		Psest_1348	0.52	-1.0
1,459,285	-		Psest_1348	0.52	-0.6
1,459,500	+		Psest_1348	0.77	+0.0
1,459,501	-		Psest_1348	0.77	+0.7
1,459,501	-		Psest_1348	0.77	+0.6
1,459,524	+		Psest_1348	0.80	-1.1
1,459,566	+		Psest_1348	0.85	+2.1
1,459,566	+		Psest_1348	0.85	-1.0
1,459,566	+		Psest_1348	0.85	-1.3
1,459,566	+		Psest_1348	0.85	-1.0
1,459,566	+		Psest_1348	0.85	-1.2
1,459,567	-		Psest_1348	0.85	+1.8
1,459,567	-		Psest_1348	0.85	-1.6
1,459,567	-		Psest_1348	0.85	+0.6
1,459,603	-		Psest_1348	0.89	-1.0
1,459,603	-		Psest_1348	0.89	-1.2
1,459,638	+				-0.1
1,459,638	+				+1.5
1,459,639	-				+0.5
1,459,639	-				+0.7
1,459,780	-				-0.0
1,459,844	+				-1.4
1,459,844	+				-0.5
1,459,845	-				-0.4
1,459,845	-				-0.0
1,459,845	-				+0.8
1,459,845	-				-2.0
1,459,845	-				-1.0
1,460,468	+		Psest_1349	0.85	-0.3
1,460,468	+		Psest_1349	0.85	-0.7
1,460,468	+		Psest_1349	0.85	-1.9
1,460,625	+				-1.4
1,460,625	+				-0.8
1,460,625	+				+1.5
1,460,642	+				+0.4
1,460,643	-				-0.8
1,460,643	-				-0.7
1,460,643	-				-1.4
1,460,647	-				-0.1
1,460,672	+				-1.3
1,460,673	-				-1.7