Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1180

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,281,360	-				+0.1
1,281,902	+		Psest_1179	0.61	-1.4
1,281,902	+		Psest_1179	0.61	-0.2
1,282,231	-				+2.0
1,282,243	-				-1.3
1,282,243	-				-1.1
1,282,252	+				-1.3
1,282,252	+				+0.2
1,282,253	-				-2.1
1,282,253	-				+0.4
1,282,253	-				+0.1
1,282,342	+				+1.1
1,282,342	+				-0.7
1,282,342	+				-0.5
1,282,343	-				+0.2
1,282,343	-				-0.3
1,282,343	-				-0.2
1,282,402	+		Psest_1180	0.15	-0.3
1,282,403	-		Psest_1180	0.16	-3.2
1,282,403	-		Psest_1180	0.16	+0.7
1,282,403	-		Psest_1180	0.16	-0.1
1,282,403	-		Psest_1180	0.16	+1.0
1,282,403	-		Psest_1180	0.16	-1.6
1,282,458	-		Psest_1180	0.23	-0.2
1,282,526	-		Psest_1180	0.31	-1.5
1,282,534	+		Psest_1180	0.32	-1.3
1,282,534	+		Psest_1180	0.32	-0.5
1,282,534	+		Psest_1180	0.32	-0.4
1,282,535	-		Psest_1180	0.32	-0.3
1,282,787	-		Psest_1180	0.65	-1.0
1,282,945	+		Psest_1180	0.85	-1.7
1,282,964	-		Psest_1180	0.87	-0.5
1,283,084	-				-2.1
1,283,084	-				+0.3
1,283,084	-				-0.3
1,283,107	+				-1.0
1,283,107	+				+0.2
1,283,107	+				+0.9
1,283,107	+				-1.3
1,283,150	+				+0.1
1,283,150	+				+0.1
1,283,171	+				-0.0
1,283,171	+				-1.9
1,283,253	+				-2.5
1,283,254	-				-0.8
1,283,508	+		Psest_1181	0.14	+1.0
1,283,610	+		Psest_1181	0.20	+1.6
1,283,638	-		Psest_1181	0.22	-1.1
1,283,638	-		Psest_1181	0.22	-1.6
1,283,814	+		Psest_1181	0.32	-0.3
1,283,814	+		Psest_1181	0.32	+1.4
1,283,814	+		Psest_1181	0.32	+0.1
1,283,814	+		Psest_1181	0.32	-0.6
1,283,814	+		Psest_1181	0.32	-0.8
1,283,814	+		Psest_1181	0.32	+0.7
1,283,814	+		Psest_1181	0.32	-0.6
1,283,814	+		Psest_1181	0.32	-0.8
1,283,815	-		Psest_1181	0.32	-2.5
1,283,869	-		Psest_1181	0.35	-0.7
1,283,869	-		Psest_1181	0.35	+1.0
1,283,907	+		Psest_1181	0.37	+1.2
1,283,908	-		Psest_1181	0.37	-1.3
1,283,908	-		Psest_1181	0.37	-1.6