Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1090

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,180,081	+				+0.6
1,180,128	+				-0.1
1,180,128	+				+1.2
1,180,128	+				+1.0
1,180,129	-				-0.3
1,180,138	+				+1.4
1,180,140	+				-1.0
1,180,240	-				+0.2
1,180,897	+		Psest_1089	0.77	-1.7
1,180,897	+		Psest_1089	0.77	-0.8
1,180,898	-		Psest_1089	0.77	-0.9
1,180,977	+		Psest_1089	0.87	+0.5
1,180,978	-		Psest_1089	0.87	+1.0
1,180,994	+		Psest_1089	0.89	-1.2
1,181,128	+				+0.4
1,181,437	+		Psest_1090	0.51	-0.8
1,181,437	+		Psest_1090	0.51	-0.0
1,181,437	+		Psest_1090	0.51	+0.4
1,181,438	-		Psest_1090	0.51	-1.2
1,181,459	-		Psest_1090	0.54	+2.0
1,181,612	+		Psest_1090	0.75	-2.7
1,181,612	+		Psest_1090	0.75	-1.6
1,181,613	-		Psest_1090	0.75	+0.1
1,181,613	-		Psest_1090	0.75	-1.9
1,181,613	-		Psest_1090	0.75	-1.0
1,181,613	-		Psest_1090	0.75	-0.7
1,181,698	+		Psest_1090	0.87	+0.5
1,181,698	+		Psest_1090	0.87	+0.4
1,181,698	+		Psest_1090	0.87	-0.6
1,181,699	-		Psest_1090	0.87	-1.4
1,181,874	+				+1.6
1,181,874	+				-1.8
1,181,874	+				-0.6
1,181,874	+				+0.8
1,181,874	+				+0.2
1,181,874	+				+0.1
1,181,874	+				+0.1
1,181,874	+				-2.7
1,181,874	+				+0.6
1,181,874	+				-0.5
1,181,874	+				-0.3
1,181,874	+				+0.5
1,181,874	+				-1.0
1,181,875	-				+0.9
1,181,875	-				-0.3
1,181,875	-				+1.2
1,181,875	-				+1.8
1,181,875	-				+0.9
1,181,875	-				+0.2
1,181,875	-				-1.4
1,181,875	-				+0.9
1,181,875	-				-1.3
1,181,875	-				-0.1
1,181,875	-				-1.4
1,181,875	-				+0.5
1,181,875	-				+0.8
1,181,875	-				-0.7
1,181,875	-				-1.9
1,181,875	-				-0.3
1,181,875	-				+0.3
1,181,875	-				-0.0
1,181,875	-				+0.6
1,181,875	-				-1.0
1,181,875	-				-0.9
1,181,875	-				-0.1
1,181,988	-				-1.7
1,182,000	+		Psest_1091	0.10	-0.3
1,182,315	+		Psest_1091	0.36	+0.5
1,182,315	+		Psest_1091	0.36	+1.1
1,182,315	+		Psest_1091	0.36	-0.4
1,182,316	-		Psest_1091	0.36	-0.2
1,182,316	-		Psest_1091	0.36	-0.5
1,182,325	-		Psest_1091	0.37	+0.4
1,182,325	-		Psest_1091	0.37	-0.4
1,182,325	-		Psest_1091	0.37	+0.0
1,182,325	-		Psest_1091	0.37	+0.6
1,182,325	-		Psest_1091	0.37	-2.0
1,182,381	+		Psest_1091	0.41	-0.3
1,182,382	-		Psest_1091	0.41	-0.3
1,182,382	-		Psest_1091	0.41	+1.6
1,182,382	-		Psest_1091	0.41	+0.8
1,182,382	-		Psest_1091	0.41	+0.4
1,182,382	-		Psest_1091	0.41	+0.3
1,182,382	-		Psest_1091	0.41	+1.0
1,182,382	-		Psest_1091	0.41	-1.1
1,182,382	-		Psest_1091	0.41	-1.1
1,182,400	-		Psest_1091	0.43	-0.6
1,182,510	+		Psest_1091	0.52	-0.8
1,182,510	+		Psest_1091	0.52	-0.8
1,182,510	+		Psest_1091	0.52	+0.3
1,182,510	+		Psest_1091	0.52	+1.4
1,182,510	+		Psest_1091	0.52	-0.4
1,182,510	+		Psest_1091	0.52	-1.5
1,182,510	+		Psest_1091	0.52	-0.1
1,182,510	+		Psest_1091	0.52	-0.3
1,182,510	+		Psest_1091	0.52	-1.5
1,182,510	+		Psest_1091	0.52	+0.7
1,182,510	+		Psest_1091	0.52	+0.2
1,182,510	+		Psest_1091	0.52	+0.5
1,182,511	-		Psest_1091	0.52	-0.1
1,182,511	-		Psest_1091	0.52	-2.7
1,182,511	-		Psest_1091	0.52	+0.1
1,182,511	-		Psest_1091	0.52	+0.4
1,182,511	-		Psest_1091	0.52	-1.0
1,182,511	-		Psest_1091	0.52	+0.6
1,182,511	-		Psest_1091	0.52	-1.0
1,182,756	+		Psest_1091	0.72	-2.0
1,182,760	-		Psest_1091	0.72	-0.2
1,182,760	-		Psest_1091	0.72	-1.8