Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1063

Experiment: syringaldehyde 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 3 mM
1,151,641	+				+1.1
1,151,642	-				-0.9
1,151,672	+				-0.4
1,151,672	+				-1.8
1,151,672	+				-0.0
1,151,672	+				+1.4
1,151,672	+				-0.4
1,151,672	+				-0.9
1,151,672	+				-0.0
1,151,672	+				-1.0
1,151,672	+				+1.3
1,151,672	+				-1.2
1,151,672	+				+2.4
1,151,672	+				+0.0
1,151,673	-				-0.4
1,151,673	-				+1.4
1,151,673	-				-1.7
1,151,673	-				+1.6
1,151,673	-				-0.6
1,151,673	-				-1.2
1,151,673	-				+0.7
1,151,673	-				-1.1
1,151,783	+		Psest_1062	0.17	-0.9
1,152,053	+		Psest_1062	0.59	+1.1
1,152,053	+		Psest_1062	0.59	+0.6
1,152,054	-		Psest_1062	0.59	-1.0
1,152,054	-		Psest_1062	0.59	+0.2
1,152,054	-		Psest_1062	0.59	-0.7
1,152,054	-		Psest_1062	0.59	+0.8
1,152,054	-		Psest_1062	0.59	+1.5
1,152,057	-		Psest_1062	0.59	+0.2
1,152,218	+		Psest_1062	0.84	+0.1
1,152,219	-		Psest_1062	0.84	+1.2
1,152,219	-		Psest_1062	0.84	-2.3
1,152,219	-		Psest_1062	0.84	-1.7
1,152,219	-		Psest_1062	0.84	+0.4
1,152,406	+				-1.0
1,152,406	+				-0.6
1,152,406	+				-0.4
1,152,406	+				-1.6
1,152,406	+				+0.1
1,152,406	+				-1.0
1,152,406	+				+0.7
1,152,407	-				+0.8
1,152,407	-				+0.5
1,152,407	-				-1.6
1,152,407	-				-0.1
1,152,407	-				+1.1
1,152,407	-				-0.4
1,152,407	-				-0.6
1,152,407	-				-0.5
1,152,565	+		Psest_1063	0.27	+1.9
1,152,565	+		Psest_1063	0.27	-2.4
1,152,565	+		Psest_1063	0.27	+0.6
1,152,566	-		Psest_1063	0.27	+1.3
1,152,566	-		Psest_1063	0.27	+0.2
1,152,566	-		Psest_1063	0.27	-0.3
1,152,580	+		Psest_1063	0.29	+0.3
1,152,581	-		Psest_1063	0.29	+0.4
1,152,581	-		Psest_1063	0.29	-0.1
1,152,733	+		Psest_1063	0.46	+1.1
1,152,931	+		Psest_1063	0.68	-0.3
1,152,931	+		Psest_1063	0.68	-1.6
1,152,932	-		Psest_1063	0.68	+0.5
1,152,932	-		Psest_1063	0.68	-2.4
1,152,932	-		Psest_1063	0.68	-1.3
1,152,932	-		Psest_1063	0.68	+1.7
1,152,932	-		Psest_1063	0.68	+0.3
1,152,932	-		Psest_1063	0.68	+3.1
1,152,932	-		Psest_1063	0.68	-2.6
1,152,938	-		Psest_1063	0.69	+0.5
1,153,050	-		Psest_1063	0.81	+0.7
1,153,088	-		Psest_1063	0.85	+3.2
1,153,088	-		Psest_1063	0.85	+0.6
1,153,088	-		Psest_1063	0.85	+0.8
1,153,127	+		Psest_1063	0.90	+0.4
1,153,127	+		Psest_1063	0.90	+0.4
1,153,252	+				-0.2
1,153,279	+				+0.8
1,153,312	+				+1.5
1,153,563	-				+0.5
1,153,606	+		Psest_1065	0.15	-0.1
1,153,607	-		Psest_1065	0.16	+0.6
1,153,713	+		Psest_1065	0.53	+0.6
1,153,882	+				-1.3
1,153,883	-				-1.1
1,153,977	+				+0.2
1,153,977	+				+0.5
1,153,977	+				+0.2
1,153,978	-				+0.6
1,153,991	+				-0.8
1,153,992	-				+1.1
1,154,042	-				+0.9
1,154,042	-				+0.1
1,154,135	-		Psest_1066	0.30	-0.1