Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10695

Experiment: D-Glucose (C) 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C) 5 mM
2,356,453	+				+0.1
2,356,454	-				+0.3
2,356,487	+				+0.3
2,356,487	+				+0.4
2,356,488	-				-0.2
2,356,488	-				-0.6
2,356,509	+				+0.7
2,356,556	-				-0.4
2,356,608	+				+0.7
2,356,608	+				+2.3
2,356,608	+				+0.2
2,356,609	-				-0.3
2,356,609	-				+0.8
2,356,609	-				+0.2
2,356,640	-				-0.7
2,356,646	+				+0.5
2,356,657	-				-0.3
2,356,657	-				+2.7
2,356,670	+				+1.4
2,356,670	+				+1.9
2,356,671	-				+0.7
2,356,671	-				-0.7
2,356,671	-				-2.1
2,356,671	-				+1.6
2,356,701	+				+0.0
2,356,701	+				-1.1
2,356,702	-				-1.5
2,356,702	-				+0.6
2,356,702	-				-3.2
2,356,702	-				+0.1
2,356,728	+				+1.6
2,356,728	+				+1.0
2,356,729	-				-0.0
2,356,729	-				+1.7
2,356,729	-				-0.7
2,356,729	-				+1.7
2,356,735	+				+0.5
2,356,778	+				+1.4
2,356,779	-				+0.1
2,356,796	+				-0.2
2,356,796	+				+0.4
2,356,804	+				+0.6
2,356,804	+				+0.3
2,356,804	+				-0.3
2,356,804	+				+0.2
2,356,804	+				+0.1
2,356,804	+				-1.8
2,356,804	+				-0.1
2,356,804	+				+1.3
2,356,805	-				-2.3
2,356,805	-				-0.4
2,356,805	-				-0.9
2,356,805	-				-1.5
2,356,805	-				-0.8
2,356,805	-				-1.7
2,356,805	-				+0.7
2,356,805	-				+1.1
2,356,805	-				-1.1
2,356,807	+				+0.1
2,356,807	+				-0.7
2,356,807	+				-1.0
2,356,808	-				+0.1
2,356,818	+				-1.3
2,356,818	+				+0.3
2,356,818	+				-1.1
2,356,819	-				-1.4
2,356,820	+				-1.7
2,356,820	+				+0.3
2,356,820	+				-0.5
2,356,821	-				+0.5
2,356,821	-				+1.7
2,356,821	-				+0.8
2,356,979	+				-1.5
2,356,980	-				+2.5
2,356,980	-				-0.2
2,357,018	+				+0.5
2,357,051	+				-0.3
2,357,051	+				-0.8
2,357,051	+				-0.9
2,357,051	+				-0.5
2,357,051	+				+1.9
2,357,051	+				+0.0
2,357,051	+				+0.7
2,357,051	+				+0.5
2,357,052	-				-0.9
2,357,052	-				+0.4
2,357,052	-				-1.5
2,357,052	-				+1.0
2,357,052	-				-0.2
2,357,052	-				+0.1
2,357,052	-				+0.8
2,357,052	-				+1.1
2,357,052	-				-0.7
2,357,052	-				-0.7
2,357,052	-				+0.7
2,357,052	-				-2.0
2,357,052	-				-0.9
2,357,052	-				-1.7
2,357,098	+				-0.2
2,357,098	+				-0.0
2,357,098	+				-0.7
2,357,098	+				+2.7
2,357,098	+				-0.4
2,357,099	-				+0.5
2,357,099	-				+2.6
2,357,099	-				-1.8
2,357,099	-				-1.2
2,357,099	-				-0.8
2,357,099	-				-0.3
2,357,099	-				+0.7
2,357,099	-				-0.7
2,357,099	-				-0.1
2,357,115	-				+1.9
2,357,115	-				+1.3
2,357,148	+				+0.7
2,357,154	+				-0.7
2,357,154	+				+1.0
2,357,154	+				+0.4
2,357,183	-				+0.7
2,357,184	+				+0.3
2,357,184	+				+1.5
2,357,184	+				-0.2
2,357,184	+				+1.4
2,357,185	-				-0.7
2,357,185	-				+0.8
2,357,263	+		PFLU_RS30645	0.32	-1.1
2,357,263	+		PFLU_RS30645	0.32	+0.6
2,357,263	+		PFLU_RS30645	0.32	+1.9
2,357,359	+		PFLU_RS30645	0.83	+0.1
2,357,359	+		PFLU_RS30645	0.83	-0.5
2,357,384	+				-0.1
2,357,384	+				+0.6
2,357,384	+				-1.4
2,357,384	+				-0.9
2,357,384	+				+0.1
2,357,384	+				+0.2
2,357,385	-				-1.0
2,357,430	+				-0.3
2,357,431	-				-2.2
2,357,642	+		PFLU_RS10695	0.50	-0.2
2,357,642	+		PFLU_RS10695	0.50	+0.4
2,357,642	+		PFLU_RS10695	0.50	+0.1
2,357,642	+		PFLU_RS10695	0.50	-2.9
2,357,643	-		PFLU_RS10695	0.50	-0.3
2,357,643	-		PFLU_RS10695	0.50	-0.9
2,357,643	-		PFLU_RS10695	0.50	+0.3
2,357,643	-		PFLU_RS10695	0.50	-0.5
2,357,643	-		PFLU_RS10695	0.50	+1.7
2,357,643	-		PFLU_RS10695	0.50	+1.1
2,357,643	-		PFLU_RS10695	0.50	-0.9
2,357,643	-		PFLU_RS10695	0.50	+1.1
2,357,646	+		PFLU_RS10695	0.50	-0.2
2,357,647	-		PFLU_RS10695	0.51	-1.2
2,357,647	-		PFLU_RS10695	0.51	+3.5
2,357,701	+		PFLU_RS10695	0.64	-0.4
2,357,701	+		PFLU_RS10695	0.64	-1.1
2,357,701	+		PFLU_RS10695	0.64	-0.7
2,357,757	+		PFLU_RS10695	0.78	+0.3
2,357,757	+		PFLU_RS10695	0.78	-0.3
2,357,757	+		PFLU_RS10695	0.78	+0.9
2,357,758	-		PFLU_RS10695	0.78	+0.1
2,357,758	-		PFLU_RS10695	0.78	-0.9
2,357,758	-		PFLU_RS10695	0.78	+0.9
2,357,758	-		PFLU_RS10695	0.78	-1.1
2,357,758	-		PFLU_RS10695	0.78	+0.1
2,357,758	-		PFLU_RS10695	0.78	-0.1
2,357,758	-		PFLU_RS10695	0.78	+2.3
2,357,842	+				+1.7
2,357,863	+				+0.7
2,357,863	+				+0.3
2,357,863	+				-0.9
2,357,863	+				-0.0
2,357,863	+				+0.0
2,357,863	+				+0.3
2,357,863	+				-1.0
2,357,863	+				-0.3
2,357,863	+				-0.2
2,357,863	+				-1.9
2,357,863	+				+2.0
2,357,863	+				+0.7
2,357,863	+				-1.4
2,357,863	+				+2.1
2,357,863	+				+0.1
2,357,863	+				-1.7
2,357,863	+				-0.9
2,357,863	+				-0.7
2,357,863	+				+0.3
2,357,863	+				-1.7
2,357,863	+				-0.5
2,357,863	+				-1.4
2,357,863	+				-0.2
2,357,863	+				+0.3
2,357,863	+				-0.7
2,357,863	+				+0.4
2,357,863	+				+0.9
2,357,863	+				-1.1
2,357,863	+				-1.3
2,357,863	+				+0.9
2,357,863	+				+0.1
2,357,864	-				-0.4
2,357,864	-				+0.9
2,357,864	-				+0.8
2,357,864	-				+1.3
2,357,864	-				+2.7
2,357,864	-				-2.0
2,357,864	-				+0.3
2,357,864	-				-0.9
2,357,864	-				+0.1
2,357,864	-				+0.7
2,357,864	-				-1.1
2,357,864	-				-1.1
2,357,864	-				+0.7
2,357,864	-				-1.3
2,357,864	-				+0.4
2,357,864	-				+1.7
2,357,864	-				+0.1
2,357,864	-				+1.7
2,357,864	-				+3.7
2,357,864	-				+1.1
2,357,864	-				-2.0
2,357,864	-				-1.7
2,357,864	-				-0.4
2,357,864	-				-1.2
2,357,864	-				-2.2
2,357,864	-				+0.1
2,357,864	-				+2.7
2,357,864	-				-0.1
2,357,864	-				+0.2
2,357,864	-				+0.8
2,357,864	-				+3.3
2,357,864	-				+0.7
2,357,864	-				-0.2
2,357,867	+				-2.0
2,357,867	+				+1.5
2,357,867	+				-1.2
2,357,867	+				+0.8
2,357,867	+				-2.0
2,357,868	-				+0.4
2,357,868	-				+2.0
2,357,868	-				-2.6
2,357,868	-				-1.9
2,357,868	-				+0.1
2,357,968	+		PFLU_RS10700	0.24	+1.2
2,357,968	+		PFLU_RS10700	0.24	+1.7
2,357,968	+		PFLU_RS10700	0.24	+0.7
2,357,968	+		PFLU_RS10700	0.24	-0.5
2,357,969	-		PFLU_RS10700	0.25	+0.5
2,357,969	-		PFLU_RS10700	0.25	+1.3
2,358,137	-		PFLU_RS10700	0.73	-0.2
2,358,162	+		PFLU_RS10700	0.81	+0.0
2,358,162	+		PFLU_RS10700	0.81	+0.3
2,358,162	+		PFLU_RS10700	0.81	+0.7
2,358,162	+		PFLU_RS10700	0.81	+2.1
2,358,162	+		PFLU_RS10700	0.81	+1.9
2,358,162	+		PFLU_RS10700	0.81	+0.6
2,358,162	+		PFLU_RS10700	0.81	-0.1
2,358,162	+		PFLU_RS10700	0.81	-0.8
2,358,162	+		PFLU_RS10700	0.81	+1.5
2,358,162	+		PFLU_RS10700	0.81	-1.5
2,358,163	-		PFLU_RS10700	0.81	+0.5
2,358,163	-		PFLU_RS10700	0.81	-1.0
2,358,163	-		PFLU_RS10700	0.81	+0.1
2,358,163	-		PFLU_RS10700	0.81	-0.5
2,358,163	-		PFLU_RS10700	0.81	+0.7
2,358,163	-		PFLU_RS10700	0.81	-0.8
2,358,163	-		PFLU_RS10700	0.81	+0.5
2,358,163	-		PFLU_RS10700	0.81	-2.4
2,358,163	-		PFLU_RS10700	0.81	-0.7
2,358,163	-		PFLU_RS10700	0.81	-1.1
2,358,163	-		PFLU_RS10700	0.81	+1.7
2,358,240	+				+0.3
2,358,240	+				-0.0
2,358,241	-				+2.9
2,358,241	-				+0.2
2,358,241	-				+0.7
2,358,355	+		PFLU_RS10705	0.19	+0.1
2,358,356	-		PFLU_RS10705	0.19	-1.1
2,358,356	-		PFLU_RS10705	0.19	+0.1
2,358,451	+		PFLU_RS10705	0.35	-1.2
2,358,451	+		PFLU_RS10705	0.35	+1.0
2,358,451	+		PFLU_RS10705	0.35	+0.5
2,358,451	+		PFLU_RS10705	0.35	+0.4
2,358,452	-		PFLU_RS10705	0.35	-0.9
2,358,452	-		PFLU_RS10705	0.35	-1.3
2,358,452	-		PFLU_RS10705	0.35	-2.3
2,358,452	-		PFLU_RS10705	0.35	-0.7
2,358,452	-		PFLU_RS10705	0.35	+1.2
2,358,452	-		PFLU_RS10705	0.35	-0.6
2,358,538	-		PFLU_RS10705	0.49	-1.2
2,358,700	+		PFLU_RS10705	0.76	-1.7
2,358,701	-		PFLU_RS10705	0.76	+0.3
2,358,800	-				-0.8
2,358,800	-				+1.1