Experiment: RCH2_defined_1percent_glucose with Chloride 600 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS03730 and BWI76_RS03735 are separated by 38 nucleotides BWI76_RS03735 and BWI76_RS03740 overlap by 4 nucleotides BWI76_RS03740 and BWI76_RS03745 are separated by 8 nucleotides
BWI76_RS03730: BWI76_RS03730 - amidohydrolase, at 773,398 to 774,501
_RS03730
BWI76_RS03735: BWI76_RS03735 - hypothetical protein, at 774,540 to 774,794
_RS03735
BWI76_RS03740: BWI76_RS03740 - hypothetical protein, at 774,791 to 775,558
_RS03740
BWI76_RS03745: BWI76_RS03745 - putative 2-hydroxyglutaryl-CoA dehydratase, at 775,567 to 776,718
_RS03745
Position (kb) 774
775
776 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 773.842 kb on + strand, within BWI76_RS03730 at 773.844 kb on + strand, within BWI76_RS03730 at 773.850 kb on - strand, within BWI76_RS03730 at 773.888 kb on - strand, within BWI76_RS03730 at 773.934 kb on - strand, within BWI76_RS03730 at 774.129 kb on + strand, within BWI76_RS03730 at 774.166 kb on + strand, within BWI76_RS03730 at 774.183 kb on + strand, within BWI76_RS03730 at 774.249 kb on + strand, within BWI76_RS03730 at 774.355 kb on - strand, within BWI76_RS03730 at 774.366 kb on + strand, within BWI76_RS03730 at 774.366 kb on + strand, within BWI76_RS03730 at 774.490 kb on + strand at 774.635 kb on - strand at 774.808 kb on + strand at 774.873 kb on + strand, within BWI76_RS03740 at 774.889 kb on + strand, within BWI76_RS03740 at 774.897 kb on - strand, within BWI76_RS03740 at 774.897 kb on - strand, within BWI76_RS03740 at 775.074 kb on + strand, within BWI76_RS03740 at 775.279 kb on - strand, within BWI76_RS03740 at 775.402 kb on + strand, within BWI76_RS03740 at 775.432 kb on + strand, within BWI76_RS03740 at 775.467 kb on + strand, within BWI76_RS03740 at 775.507 kb on + strand at 775.598 kb on + strand at 775.756 kb on - strand, within BWI76_RS03745 at 775.783 kb on - strand, within BWI76_RS03745 at 775.866 kb on + strand, within BWI76_RS03745 at 776.359 kb on - strand, within BWI76_RS03745 at 776.431 kb on - strand, within BWI76_RS03745 at 776.492 kb on - strand, within BWI76_RS03745
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 600 mM remove 773,842 + BWI76_RS03730 0.40 -0.6 773,844 + BWI76_RS03730 0.40 +0.0 773,850 - BWI76_RS03730 0.41 +0.3 773,888 - BWI76_RS03730 0.44 +1.0 773,934 - BWI76_RS03730 0.49 +0.2 774,129 + BWI76_RS03730 0.66 -0.8 774,166 + BWI76_RS03730 0.70 +0.8 774,183 + BWI76_RS03730 0.71 +0.0 774,249 + BWI76_RS03730 0.77 +3.1 774,355 - BWI76_RS03730 0.87 +0.4 774,366 + BWI76_RS03730 0.88 +0.2 774,366 + BWI76_RS03730 0.88 -0.3 774,490 + -0.4 774,635 - +3.4 774,808 + -0.7 774,873 + BWI76_RS03740 0.11 +0.8 774,889 + BWI76_RS03740 0.13 -1.9 774,897 - BWI76_RS03740 0.14 -0.6 774,897 - BWI76_RS03740 0.14 -0.4 775,074 + BWI76_RS03740 0.37 +0.6 775,279 - BWI76_RS03740 0.64 -0.2 775,402 + BWI76_RS03740 0.80 +0.1 775,432 + BWI76_RS03740 0.83 +0.5 775,467 + BWI76_RS03740 0.88 +2.0 775,507 + -0.6 775,598 + +0.1 775,756 - BWI76_RS03745 0.16 -0.1 775,783 - BWI76_RS03745 0.19 +0.7 775,866 + BWI76_RS03745 0.26 -1.5 776,359 - BWI76_RS03745 0.69 -2.7 776,431 - BWI76_RS03745 0.75 +2.4 776,492 - BWI76_RS03745 0.80 -0.1
Or see this region's nucleotide sequence