Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0693 and Psest_0694 are separated by 180 nucleotides Psest_0694 and Psest_0695 are separated by 28 nucleotides Psest_0695 and Psest_0696 are separated by 34 nucleotides Psest_0696 and Psest_0697 are separated by 21 nucleotides Psest_0697 and Psest_0698 are separated by 103 nucleotides
Psest_0693: Psest_0693 - His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 757,393 to 759,555
_0693
Psest_0694: Psest_0694 - ribosomal protein S6, at 759,736 to 760,152
_0694
Psest_0695: Psest_0695 - ribosomal protein S18, at 760,181 to 760,411
_0695
Psest_0696: Psest_0696 - hypothetical protein, at 760,446 to 761,339
_0696
Psest_0697: Psest_0697 - ribosomal protein L9, at 761,361 to 761,807
_0697
Psest_0698: Psest_0698 - replicative DNA helicase, at 761,911 to 763,305
_0698
Position (kb) 760
761
762 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 759.487 kb on + strand at 759.487 kb on + strand at 759.488 kb on - strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.549 kb on + strand at 759.550 kb on - strand at 759.556 kb on + strand at 759.556 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 759.615 kb on + strand at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.729 kb on + strand, within Psest_0696 at 760.730 kb on - strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.755 kb on + strand, within Psest_0696 at 760.756 kb on - strand, within Psest_0696 at 760.986 kb on + strand, within Psest_0696 at 760.987 kb on - strand, within Psest_0696 at 761.131 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.205 kb on + strand, within Psest_0696 at 761.206 kb on - strand, within Psest_0696 at 761.543 kb on + strand, within Psest_0697 at 761.740 kb on - strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.746 kb on + strand, within Psest_0697 at 761.747 kb on - strand, within Psest_0697 at 761.890 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.008 mg/ml remove 759,487 + -1.7 759,487 + -1.0 759,488 - -1.9 759,549 + -0.7 759,549 + +4.5 759,549 + +0.2 759,550 - +2.2 759,556 + -2.2 759,556 + -0.1 759,615 + +2.4 759,615 + +1.3 759,615 + +2.4 759,615 + +0.4 760,729 + Psest_0696 0.32 -1.4 760,729 + Psest_0696 0.32 -0.2 760,729 + Psest_0696 0.32 -1.4 760,730 - Psest_0696 0.32 -2.2 760,755 + Psest_0696 0.35 +0.3 760,755 + Psest_0696 0.35 -0.2 760,755 + Psest_0696 0.35 -1.2 760,755 + Psest_0696 0.35 -0.6 760,755 + Psest_0696 0.35 -1.7 760,755 + Psest_0696 0.35 +0.5 760,755 + Psest_0696 0.35 -1.1 760,755 + Psest_0696 0.35 -0.8 760,755 + Psest_0696 0.35 +0.2 760,755 + Psest_0696 0.35 -0.2 760,756 - Psest_0696 0.35 -2.6 760,986 + Psest_0696 0.60 -0.8 760,987 - Psest_0696 0.61 +1.7 761,131 + Psest_0696 0.77 +0.0 761,205 + Psest_0696 0.85 -0.9 761,205 + Psest_0696 0.85 +0.8 761,205 + Psest_0696 0.85 -1.7 761,205 + Psest_0696 0.85 -0.6 761,206 - Psest_0696 0.85 +0.4 761,543 + Psest_0697 0.41 -1.2 761,740 - Psest_0697 0.85 -0.9 761,746 + Psest_0697 0.86 +0.8 761,746 + Psest_0697 0.86 -1.5 761,746 + Psest_0697 0.86 -0.8 761,746 + Psest_0697 0.86 -0.8 761,746 + Psest_0697 0.86 -0.9 761,746 + Psest_0697 0.86 -0.6 761,747 - Psest_0697 0.86 -0.1 761,890 + +1.0
Or see this region's nucleotide sequence