Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0481 and Psest_0482 are separated by 166 nucleotides Psest_0482 and Psest_0483 are separated by 63 nucleotides
Psest_0481: Psest_0481 - Predicted phosphohydrolases, at 530,851 to 531,666
_0481
Psest_0482: Psest_0482 - yqiA-like hydrolase, affects the cell envelope <small>(from data)</small>, at 531,833 to 532,438
_0482
Psest_0483: Psest_0483 - DNA topoisomerase IV, B subunit, proteobacterial, at 532,502 to 534,481
_0483
Position (kb) 531
532
533 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 530.955 kb on + strand, within Psest_0481 at 531.662 kb on - strand at 531.738 kb on + strand at 531.746 kb on + strand at 531.746 kb on + strand at 531.746 kb on + strand at 531.746 kb on + strand at 531.746 kb on + strand at 531.746 kb on + strand at 531.747 kb on - strand at 531.747 kb on - strand at 531.747 kb on - strand at 531.747 kb on - strand at 531.747 kb on - strand at 531.747 kb on - strand at 531.802 kb on + strand at 531.802 kb on + strand at 531.803 kb on - strand at 531.803 kb on - strand at 531.820 kb on - strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.860 kb on + strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.861 kb on - strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on + strand at 531.862 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.863 kb on - strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.864 kb on + strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 531.865 kb on - strand at 532.056 kb on - strand, within Psest_0482 at 532.058 kb on + strand, within Psest_0482 at 532.058 kb on + strand, within Psest_0482 at 532.058 kb on + strand, within Psest_0482 at 532.142 kb on + strand, within Psest_0482 at 532.166 kb on + strand, within Psest_0482 at 532.292 kb on + strand, within Psest_0482 at 532.313 kb on + strand, within Psest_0482 at 532.313 kb on + strand, within Psest_0482 at 532.313 kb on + strand, within Psest_0482 at 532.333 kb on + strand, within Psest_0482 at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand at 532.576 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.008 mg/ml remove 530,955 + Psest_0481 0.13 +0.5 531,662 - +0.4 531,738 + -0.4 531,746 + +0.6 531,746 + -0.7 531,746 + -0.6 531,746 + -1.5 531,746 + -1.8 531,746 + -0.4 531,747 - +0.7 531,747 - +1.4 531,747 - -1.2 531,747 - +0.9 531,747 - +2.4 531,747 - -2.3 531,802 + -0.6 531,802 + -0.3 531,803 - -0.6 531,803 - -0.6 531,820 - -0.1 531,860 + -1.6 531,860 + +0.4 531,860 + -0.7 531,860 + -0.5 531,860 + -2.1 531,860 + -0.2 531,860 + +1.1 531,860 + -2.3 531,860 + -0.8 531,861 - -1.3 531,861 - -0.8 531,861 - +0.1 531,861 - +0.2 531,861 - -0.4 531,861 - +0.5 531,861 - -0.3 531,862 + -1.0 531,862 + -0.1 531,862 + -1.5 531,862 + +1.2 531,862 + -1.2 531,862 + -2.6 531,862 + +0.7 531,862 + -3.2 531,862 + +0.1 531,862 + -0.7 531,862 + +0.3 531,862 + -1.1 531,862 - +2.1 531,863 - +0.4 531,863 - -0.5 531,863 - -0.8 531,863 - -0.3 531,863 - -1.4 531,863 - -0.1 531,863 - -0.4 531,863 - -0.1 531,863 - -0.3 531,863 - -0.4 531,863 - -1.9 531,863 - -0.9 531,863 - +0.4 531,864 + -2.3 531,864 + +0.6 531,864 + -0.4 531,864 + -1.6 531,864 + +2.4 531,864 + -0.8 531,864 + -0.0 531,864 + +0.1 531,864 + -0.6 531,864 + +0.4 531,864 + +0.0 531,864 + +0.4 531,865 - -0.3 531,865 - +1.7 531,865 - +2.1 531,865 - +0.6 531,865 - -0.7 531,865 - +1.6 531,865 - -0.3 531,865 - -0.4 531,865 - -1.4 531,865 - -2.1 531,865 - +0.1 531,865 - +0.1 531,865 - +0.0 532,056 - Psest_0482 0.37 -1.6 532,058 + Psest_0482 0.37 -2.9 532,058 + Psest_0482 0.37 -0.7 532,058 + Psest_0482 0.37 -1.4 532,142 + Psest_0482 0.51 -1.5 532,166 + Psest_0482 0.55 -1.0 532,292 + Psest_0482 0.76 -0.1 532,313 + Psest_0482 0.79 -0.6 532,313 + Psest_0482 0.79 -1.6 532,313 + Psest_0482 0.79 -1.1 532,333 + Psest_0482 0.83 -2.6 532,576 + -1.1 532,576 + +2.3 532,576 + -1.1 532,576 + +1.2 532,576 + +1.2 532,576 + -0.6 532,576 + +1.0 532,576 + +1.1 532,576 + +1.1 532,576 + +2.1
Or see this region's nucleotide sequence