Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4045 and Psest_4046 overlap by 4 nucleotides Psest_4046 and Psest_4047 overlap by 1 nucleotides
Psest_4045: Psest_4045 - Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen, at 4,217,687 to 4,219,096
_4045
Psest_4046: Psest_4046 - hypothetical protein, at 4,219,093 to 4,220,262
_4046
Psest_4047: Psest_4047 - Restriction endonuclease S subunits, at 4,220,262 to 4,221,683
_4047
Position (kb) 4219
4220
4221 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4218.313 kb on + strand, within Psest_4045 at 4218.324 kb on + strand, within Psest_4045 at 4218.324 kb on + strand, within Psest_4045 at 4218.324 kb on + strand, within Psest_4045 at 4218.325 kb on - strand, within Psest_4045 at 4218.325 kb on - strand, within Psest_4045 at 4218.325 kb on - strand, within Psest_4045 at 4218.325 kb on - strand, within Psest_4045 at 4218.325 kb on - strand, within Psest_4045 at 4218.409 kb on - strand, within Psest_4045 at 4218.522 kb on - strand, within Psest_4045 at 4218.790 kb on + strand, within Psest_4045 at 4218.938 kb on - strand, within Psest_4045 at 4219.102 kb on + strand at 4219.102 kb on + strand at 4219.102 kb on + strand at 4219.102 kb on + strand at 4219.102 kb on + strand at 4219.102 kb on + strand at 4219.103 kb on - strand at 4219.103 kb on - strand at 4219.103 kb on - strand at 4219.103 kb on - strand at 4219.103 kb on - strand at 4219.103 kb on - strand at 4219.170 kb on + strand at 4219.196 kb on + strand at 4219.216 kb on + strand, within Psest_4046 at 4219.222 kb on + strand, within Psest_4046 at 4219.223 kb on - strand, within Psest_4046 at 4219.223 kb on - strand, within Psest_4046 at 4219.260 kb on + strand, within Psest_4046 at 4219.260 kb on + strand, within Psest_4046 at 4219.261 kb on - strand, within Psest_4046 at 4219.326 kb on + strand, within Psest_4046 at 4219.326 kb on + strand, within Psest_4046 at 4219.326 kb on + strand, within Psest_4046 at 4219.326 kb on + strand, within Psest_4046 at 4219.326 kb on + strand, within Psest_4046 at 4219.327 kb on - strand, within Psest_4046 at 4219.366 kb on + strand, within Psest_4046 at 4219.366 kb on + strand, within Psest_4046 at 4219.366 kb on + strand, within Psest_4046 at 4219.372 kb on + strand, within Psest_4046 at 4219.373 kb on - strand, within Psest_4046 at 4219.373 kb on - strand, within Psest_4046 at 4219.373 kb on - strand, within Psest_4046 at 4219.390 kb on - strand, within Psest_4046 at 4219.458 kb on - strand, within Psest_4046 at 4219.566 kb on + strand, within Psest_4046 at 4219.566 kb on + strand, within Psest_4046 at 4219.566 kb on + strand, within Psest_4046 at 4219.566 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.590 kb on + strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.591 kb on - strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.592 kb on + strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.593 kb on - strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.771 kb on + strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.772 kb on - strand, within Psest_4046 at 4219.774 kb on + strand, within Psest_4046 at 4219.774 kb on + strand, within Psest_4046 at 4219.774 kb on + strand, within Psest_4046 at 4219.775 kb on - strand, within Psest_4046 at 4219.775 kb on - strand, within Psest_4046 at 4219.775 kb on - strand, within Psest_4046 at 4219.775 kb on - strand, within Psest_4046 at 4219.789 kb on + strand at 4219.789 kb on + strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.790 kb on - strand, within Psest_4046 at 4219.794 kb on - strand, within Psest_4046 at 4219.899 kb on + strand, within Psest_4046 at 4219.899 kb on + strand, within Psest_4046 at 4219.900 kb on - strand, within Psest_4046 at 4219.900 kb on - strand, within Psest_4046 at 4219.900 kb on - strand, within Psest_4046 at 4219.900 kb on - strand, within Psest_4046 at 4219.900 kb on - strand, within Psest_4046 at 4219.951 kb on + strand, within Psest_4046 at 4219.951 kb on + strand, within Psest_4046 at 4219.952 kb on - strand, within Psest_4046 at 4219.952 kb on - strand, within Psest_4046 at 4219.952 kb on - strand, within Psest_4046 at 4219.992 kb on + strand, within Psest_4046 at 4220.082 kb on - strand, within Psest_4046 at 4220.095 kb on + strand, within Psest_4046 at 4220.095 kb on + strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.096 kb on - strand, within Psest_4046 at 4220.108 kb on + strand, within Psest_4046 at 4220.109 kb on - strand, within Psest_4046 at 4220.136 kb on + strand, within Psest_4046 at 4220.136 kb on + strand, within Psest_4046 at 4220.137 kb on - strand, within Psest_4046 at 4220.137 kb on - strand, within Psest_4046 at 4220.192 kb on + strand at 4220.192 kb on + strand at 4220.192 kb on + strand at 4220.193 kb on - strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.254 kb on + strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.255 kb on - strand at 4220.256 kb on + strand at 4220.256 kb on + strand at 4220.256 kb on + strand at 4220.451 kb on + strand, within Psest_4047 at 4220.452 kb on - strand, within Psest_4047 at 4220.538 kb on + strand, within Psest_4047 at 4220.538 kb on + strand, within Psest_4047 at 4220.573 kb on + strand, within Psest_4047 at 4220.882 kb on + strand, within Psest_4047 at 4220.946 kb on + strand, within Psest_4047 at 4220.946 kb on + strand, within Psest_4047 at 4220.946 kb on + strand, within Psest_4047 at 4220.946 kb on + strand, within Psest_4047 at 4220.946 kb on + strand, within Psest_4047 at 4221.192 kb on + strand, within Psest_4047 at 4221.192 kb on + strand, within Psest_4047 at 4221.193 kb on - strand, within Psest_4047 at 4221.213 kb on + strand, within Psest_4047
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.008 mg/ml remove 4,218,313 + Psest_4045 0.44 -1.3 4,218,324 + Psest_4045 0.45 -2.0 4,218,324 + Psest_4045 0.45 -2.3 4,218,324 + Psest_4045 0.45 -0.3 4,218,325 - Psest_4045 0.45 -2.4 4,218,325 - Psest_4045 0.45 -2.3 4,218,325 - Psest_4045 0.45 -1.0 4,218,325 - Psest_4045 0.45 +0.1 4,218,325 - Psest_4045 0.45 -0.5 4,218,409 - Psest_4045 0.51 -0.8 4,218,522 - Psest_4045 0.59 -0.4 4,218,790 + Psest_4045 0.78 -1.6 4,218,938 - Psest_4045 0.89 +0.9 4,219,102 + -1.7 4,219,102 + -0.1 4,219,102 + -0.3 4,219,102 + -1.0 4,219,102 + +0.4 4,219,102 + +0.4 4,219,103 - -0.0 4,219,103 - +0.3 4,219,103 - +0.0 4,219,103 - +0.2 4,219,103 - +0.1 4,219,103 - +0.8 4,219,170 + -0.6 4,219,196 + +0.5 4,219,216 + Psest_4046 0.11 -0.0 4,219,222 + Psest_4046 0.11 +1.0 4,219,223 - Psest_4046 0.11 -1.6 4,219,223 - Psest_4046 0.11 +0.2 4,219,260 + Psest_4046 0.14 +0.0 4,219,260 + Psest_4046 0.14 +1.7 4,219,261 - Psest_4046 0.14 +0.7 4,219,326 + Psest_4046 0.20 +0.7 4,219,326 + Psest_4046 0.20 +1.9 4,219,326 + Psest_4046 0.20 +0.6 4,219,326 + Psest_4046 0.20 +0.1 4,219,326 + Psest_4046 0.20 -0.8 4,219,327 - Psest_4046 0.20 -0.4 4,219,366 + Psest_4046 0.23 -0.6 4,219,366 + Psest_4046 0.23 -0.6 4,219,366 + Psest_4046 0.23 -0.3 4,219,372 + Psest_4046 0.24 +1.3 4,219,373 - Psest_4046 0.24 -0.6 4,219,373 - Psest_4046 0.24 +0.6 4,219,373 - Psest_4046 0.24 -1.5 4,219,390 - Psest_4046 0.25 +3.4 4,219,458 - Psest_4046 0.31 -1.1 4,219,566 + Psest_4046 0.40 +0.1 4,219,566 + Psest_4046 0.40 +1.5 4,219,566 + Psest_4046 0.40 +0.9 4,219,566 + Psest_4046 0.40 +0.5 4,219,590 + Psest_4046 0.42 -1.0 4,219,590 + Psest_4046 0.42 -0.4 4,219,590 + Psest_4046 0.42 -1.8 4,219,590 + Psest_4046 0.42 +0.2 4,219,590 + Psest_4046 0.42 +2.5 4,219,590 + Psest_4046 0.42 +2.1 4,219,590 + Psest_4046 0.42 +1.8 4,219,590 + Psest_4046 0.42 -1.4 4,219,590 + Psest_4046 0.42 +4.3 4,219,590 + Psest_4046 0.42 +0.1 4,219,591 - Psest_4046 0.43 -0.5 4,219,591 - Psest_4046 0.43 -1.5 4,219,591 - Psest_4046 0.43 +2.5 4,219,591 - Psest_4046 0.43 +0.4 4,219,591 - Psest_4046 0.43 -0.2 4,219,591 - Psest_4046 0.43 +0.3 4,219,591 - Psest_4046 0.43 -2.0 4,219,591 - Psest_4046 0.43 +0.3 4,219,591 - Psest_4046 0.43 +0.2 4,219,591 - Psest_4046 0.43 -0.5 4,219,591 - Psest_4046 0.43 +0.5 4,219,592 + Psest_4046 0.43 +2.1 4,219,592 + Psest_4046 0.43 -0.6 4,219,592 + Psest_4046 0.43 +0.3 4,219,592 + Psest_4046 0.43 -0.0 4,219,592 + Psest_4046 0.43 +1.7 4,219,592 + Psest_4046 0.43 +0.6 4,219,592 + Psest_4046 0.43 +0.2 4,219,592 + Psest_4046 0.43 -1.9 4,219,592 + Psest_4046 0.43 +1.8 4,219,593 - Psest_4046 0.43 +2.2 4,219,593 - Psest_4046 0.43 +0.2 4,219,593 - Psest_4046 0.43 +0.1 4,219,593 - Psest_4046 0.43 +1.7 4,219,593 - Psest_4046 0.43 +0.8 4,219,593 - Psest_4046 0.43 -0.5 4,219,593 - Psest_4046 0.43 -2.0 4,219,771 + Psest_4046 0.58 +0.2 4,219,771 + Psest_4046 0.58 +1.1 4,219,771 + Psest_4046 0.58 -0.9 4,219,771 + Psest_4046 0.58 +0.8 4,219,771 + Psest_4046 0.58 -0.3 4,219,771 + Psest_4046 0.58 +1.6 4,219,771 + Psest_4046 0.58 +1.0 4,219,771 + Psest_4046 0.58 -2.0 4,219,771 + Psest_4046 0.58 +1.7 4,219,771 + Psest_4046 0.58 +1.4 4,219,771 + Psest_4046 0.58 +0.5 4,219,771 + Psest_4046 0.58 -1.5 4,219,771 + Psest_4046 0.58 -1.1 4,219,771 + Psest_4046 0.58 +0.3 4,219,771 + Psest_4046 0.58 +3.3 4,219,771 + Psest_4046 0.58 -1.9 4,219,771 + Psest_4046 0.58 +0.2 4,219,772 - Psest_4046 0.58 +1.1 4,219,772 - Psest_4046 0.58 +0.1 4,219,772 - Psest_4046 0.58 +0.1 4,219,772 - Psest_4046 0.58 +1.7 4,219,772 - Psest_4046 0.58 +1.6 4,219,772 - Psest_4046 0.58 -1.0 4,219,772 - Psest_4046 0.58 -2.0 4,219,772 - Psest_4046 0.58 -1.4 4,219,772 - Psest_4046 0.58 +0.1 4,219,772 - Psest_4046 0.58 -2.1 4,219,772 - Psest_4046 0.58 -0.3 4,219,774 + Psest_4046 0.58 +1.0 4,219,774 + Psest_4046 0.58 +0.1 4,219,774 + Psest_4046 0.58 -0.5 4,219,775 - Psest_4046 0.58 +1.7 4,219,775 - Psest_4046 0.58 -0.9 4,219,775 - Psest_4046 0.58 -0.2 4,219,775 - Psest_4046 0.58 +2.8 4,219,789 + -0.5 4,219,789 + Psest_4046 0.59 +1.2 4,219,790 - Psest_4046 0.60 +2.0 4,219,790 - Psest_4046 0.60 -0.4 4,219,790 - Psest_4046 0.60 -0.2 4,219,790 - Psest_4046 0.60 +0.2 4,219,790 - Psest_4046 0.60 -0.9 4,219,790 - Psest_4046 0.60 -0.6 4,219,790 - Psest_4046 0.60 +0.9 4,219,790 - Psest_4046 0.60 +0.4 4,219,790 - Psest_4046 0.60 +3.3 4,219,790 - Psest_4046 0.60 -0.3 4,219,790 - Psest_4046 0.60 -0.5 4,219,794 - Psest_4046 0.60 +0.2 4,219,899 + Psest_4046 0.69 +2.6 4,219,899 + Psest_4046 0.69 -1.9 4,219,900 - Psest_4046 0.69 +0.1 4,219,900 - Psest_4046 0.69 -1.8 4,219,900 - Psest_4046 0.69 -1.3 4,219,900 - Psest_4046 0.69 -0.6 4,219,900 - Psest_4046 0.69 +1.9 4,219,951 + Psest_4046 0.73 +0.1 4,219,951 + Psest_4046 0.73 -0.7 4,219,952 - Psest_4046 0.73 -0.6 4,219,952 - Psest_4046 0.73 +2.4 4,219,952 - Psest_4046 0.73 -0.3 4,219,992 + Psest_4046 0.77 +1.8 4,220,082 - Psest_4046 0.85 +1.9 4,220,095 + Psest_4046 0.86 +0.5 4,220,095 + Psest_4046 0.86 -1.1 4,220,096 - Psest_4046 0.86 +0.5 4,220,096 - Psest_4046 0.86 -1.0 4,220,096 - Psest_4046 0.86 +1.1 4,220,096 - Psest_4046 0.86 -1.5 4,220,096 - Psest_4046 0.86 -3.2 4,220,096 - Psest_4046 0.86 -1.6 4,220,096 - Psest_4046 0.86 +1.2 4,220,108 + Psest_4046 0.87 -1.4 4,220,109 - Psest_4046 0.87 -2.1 4,220,136 + Psest_4046 0.89 -0.4 4,220,136 + Psest_4046 0.89 +3.1 4,220,137 - Psest_4046 0.89 -0.7 4,220,137 - Psest_4046 0.89 +1.4 4,220,192 + -0.0 4,220,192 + +0.2 4,220,192 + +1.7 4,220,193 - -0.3 4,220,254 + +0.5 4,220,254 + -0.2 4,220,254 + -3.3 4,220,254 + +1.3 4,220,254 + +0.9 4,220,254 + -0.3 4,220,254 + +0.7 4,220,255 - -0.4 4,220,255 - +1.5 4,220,255 - +0.5 4,220,255 - +0.2 4,220,255 - +1.3 4,220,255 - +0.7 4,220,255 - +1.0 4,220,255 - -3.1 4,220,255 - +1.7 4,220,256 + -0.8 4,220,256 + -1.4 4,220,256 + -0.2 4,220,451 + Psest_4047 0.13 +0.5 4,220,452 - Psest_4047 0.13 +2.5 4,220,538 + Psest_4047 0.19 +0.6 4,220,538 + Psest_4047 0.19 -1.0 4,220,573 + Psest_4047 0.22 -1.4 4,220,882 + Psest_4047 0.44 +1.6 4,220,946 + Psest_4047 0.48 -1.6 4,220,946 + Psest_4047 0.48 -1.4 4,220,946 + Psest_4047 0.48 +0.5 4,220,946 + Psest_4047 0.48 +0.2 4,220,946 + Psest_4047 0.48 +1.2 4,221,192 + Psest_4047 0.65 +1.3 4,221,192 + Psest_4047 0.65 -0.6 4,221,193 - Psest_4047 0.65 +1.0 4,221,213 + Psest_4047 0.67 -2.3
Or see this region's nucleotide sequence