Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2784

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
2,978,129	+				+0.3
2,978,129	+				+0.8
2,978,129	+				+0.8
2,978,129	+				+0.9
2,978,129	+				+1.4
2,978,129	+				+2.0
2,978,129	+				+1.3
2,978,130	-				+1.2
2,978,130	-				+1.7
2,978,140	+				+0.0
2,978,140	+				+1.0
2,978,141	-				-0.7
2,978,141	-				+0.2
2,978,141	-				+1.2
2,978,151	-				-1.2
2,978,179	+				-0.0
2,978,180	-				+1.3
2,978,182	+				-0.3
2,978,182	+				+0.9
2,978,182	+				+0.7
2,978,182	+				-0.5
2,978,182	+				-1.7
2,978,182	+				-0.5
2,978,182	+				+0.7
2,978,183	-				+1.2
2,978,183	-				-2.4
2,978,183	-				+1.4
2,978,183	-				-0.4
2,978,183	-				+0.3
2,978,183	-				+0.9
2,978,186	+				+0.0
2,978,186	+				-0.4
2,978,187	-				+0.6
2,978,187	-				-1.2
2,978,187	-				+0.1
2,978,187	-				-1.0
2,978,187	-				+0.7
2,978,187	-				-1.8
2,978,187	-				+1.8
2,978,187	-				-2.1
2,978,187	-				-0.4
2,978,187	-				-0.1
2,978,340	+				-0.4
2,978,340	+				-2.5
2,978,340	+				-1.5
2,978,341	-				-0.8
2,978,341	-				-1.0
2,978,772	+				-0.4
2,978,813	+				+0.1
2,978,813	+				-1.8
2,978,814	-				+2.4
2,978,814	-				-0.2
2,978,841	+				+0.6
2,978,841	+				-0.8
2,978,918	+				-0.4
2,978,918	+				+1.9
2,978,918	+				-0.2
2,978,918	+				+2.0
2,978,918	+				-2.1
2,978,918	+				+0.4
2,978,918	+				-1.1
2,978,918	+				+1.9
2,978,918	+				+0.8
2,978,918	+				+0.2
2,978,918	+				-0.7
2,978,918	+				-0.8
2,978,918	+				+1.9
2,978,918	+				+0.4
2,978,918	+				+1.0
2,978,919	-				-0.2
2,978,919	-				-1.7
2,978,919	-				-0.9
2,978,919	-				-1.3
2,978,919	-				+0.7
2,978,919	-				-0.3
2,978,919	-				+1.2
2,978,919	-				-0.2
2,979,084	+		Psest_2784	0.26	+1.0
2,979,084	+		Psest_2784	0.26	-1.4
2,979,084	+		Psest_2784	0.26	-0.2
2,979,084	+		Psest_2784	0.26	-0.4
2,979,084	+		Psest_2784	0.26	+0.2
2,979,084	+		Psest_2784	0.26	-1.0
2,979,084	+		Psest_2784	0.26	-1.7
2,979,084	+		Psest_2784	0.26	+0.7
2,979,084	+		Psest_2784	0.26	+3.7
2,979,084	+		Psest_2784	0.26	-2.4
2,979,084	+		Psest_2784	0.26	-1.8
2,979,085	-		Psest_2784	0.26	-0.6
2,979,085	-		Psest_2784	0.26	+2.2
2,979,085	-		Psest_2784	0.26	-2.1
2,979,085	-		Psest_2784	0.26	-1.3
2,979,085	-		Psest_2784	0.26	-0.1
2,979,085	-		Psest_2784	0.26	-0.9
2,979,085	-		Psest_2784	0.26	-2.0
2,979,085	-		Psest_2784	0.26	+0.3
2,979,085	-		Psest_2784	0.26	-0.4
2,979,085	-		Psest_2784	0.26	+0.8
2,979,085	-		Psest_2784	0.26	-0.9
2,979,085	-		Psest_2784	0.26	-1.7
2,979,085	-		Psest_2784	0.26	-1.3
2,979,085	-		Psest_2784	0.26	-2.1
2,979,085	-		Psest_2784	0.26	-0.8
2,979,085	-		Psest_2784	0.26	-1.4
2,979,085	-		Psest_2784	0.26	+0.6
2,979,094	+		Psest_2784	0.27	-1.2
2,979,094	+		Psest_2784	0.27	-0.3
2,979,094	+		Psest_2784	0.27	-1.0
2,979,094	+		Psest_2784	0.27	-0.0
2,979,095	-		Psest_2784	0.28	+0.3
2,979,095	-		Psest_2784	0.28	-0.8
2,979,095	-		Psest_2784	0.28	-0.2
2,979,095	-		Psest_2784	0.28	-0.1
2,979,095	-		Psest_2784	0.28	+0.8
2,979,095	-		Psest_2784	0.28	-0.7
2,979,095	-		Psest_2784	0.28	-1.0
2,979,095	-		Psest_2784	0.28	+0.2
2,979,095	-		Psest_2784	0.28	+0.8
2,979,095	-		Psest_2784	0.28	-0.6
2,979,095	-		Psest_2784	0.28	-1.1
2,979,258	+		Psest_2784	0.48	+1.0
2,979,394	+		Psest_2784	0.65	-0.7
2,979,709	+				-1.8
2,979,934	+				-1.1
2,979,934	+				+0.1
2,979,934	+				-1.0
2,979,934	+				-0.6
2,979,935	-				-2.8
2,979,935	-				-0.8
2,979,935	-				-0.0
2,979,935	-				-0.4
2,979,935	-				-1.3
2,979,935	-				+0.6
2,979,935	-				+1.1
2,979,935	-				-0.2
2,979,935	-				-1.5
2,980,033	+				+0.9
2,980,034	-				+0.8
2,980,034	-				+0.0
2,980,149	+		Psest_2786	0.19	-1.0