Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2768 and Psest_2769 are separated by 47 nucleotides Psest_2769 and Psest_2770 are separated by 276 nucleotides Psest_2770 and Psest_2771 are separated by 75 nucleotides
Psest_2768: Psest_2768 - Kef-type K+ transport systems, predicted NAD-binding component, at 2,963,561 to 2,964,349
_2768
Psest_2769: Psest_2769 - hypothetical protein, at 2,964,397 to 2,964,834
_2769
Psest_2770: Psest_2770 - Superfamily II DNA and RNA helicases, at 2,965,111 to 2,967,471
_2770
Psest_2771: Psest_2771 - Predicted membrane protein, at 2,967,547 to 2,968,311
_2771
Position (kb)
2965
2966
2967
2968 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2964.410 kb on + strand at 2964.449 kb on + strand, within Psest_2769 at 2964.449 kb on + strand, within Psest_2769 at 2964.449 kb on + strand, within Psest_2769 at 2964.450 kb on - strand, within Psest_2769 at 2964.542 kb on + strand, within Psest_2769 at 2964.542 kb on + strand, within Psest_2769 at 2964.543 kb on - strand, within Psest_2769 at 2964.543 kb on - strand, within Psest_2769 at 2964.543 kb on - strand, within Psest_2769 at 2964.585 kb on - strand, within Psest_2769 at 2964.585 kb on - strand, within Psest_2769 at 2964.617 kb on + strand, within Psest_2769 at 2964.680 kb on + strand, within Psest_2769 at 2964.680 kb on + strand, within Psest_2769 at 2964.680 kb on + strand, within Psest_2769 at 2964.681 kb on - strand, within Psest_2769 at 2964.681 kb on - strand, within Psest_2769 at 2964.681 kb on - strand, within Psest_2769 at 2964.681 kb on - strand, within Psest_2769 at 2964.681 kb on - strand, within Psest_2769 at 2964.809 kb on - strand at 2964.809 kb on - strand at 2964.838 kb on + strand at 2964.838 kb on + strand at 2964.838 kb on + strand at 2964.838 kb on + strand at 2964.839 kb on - strand at 2964.839 kb on - strand at 2964.839 kb on - strand at 2964.926 kb on + strand at 2964.926 kb on + strand at 2964.927 kb on - strand at 2965.022 kb on + strand at 2965.023 kb on - strand at 2965.023 kb on - strand at 2965.023 kb on - strand at 2965.077 kb on + strand at 2965.128 kb on + strand at 2965.129 kb on - strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.243 kb on + strand at 2965.244 kb on - strand at 2965.244 kb on - strand at 2966.137 kb on + strand, within Psest_2770 at 2966.137 kb on + strand, within Psest_2770 at 2966.137 kb on + strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.138 kb on - strand, within Psest_2770 at 2966.307 kb on - strand, within Psest_2770 at 2966.307 kb on - strand, within Psest_2770 at 2966.307 kb on - strand, within Psest_2770 at 2966.629 kb on + strand, within Psest_2770 at 2966.629 kb on + strand, within Psest_2770 at 2966.759 kb on - strand, within Psest_2770 at 2966.798 kb on + strand, within Psest_2770 at 2966.799 kb on - strand, within Psest_2770 at 2966.799 kb on - strand, within Psest_2770 at 2967.043 kb on - strand, within Psest_2770 at 2967.043 kb on - strand, within Psest_2770 at 2967.049 kb on + strand, within Psest_2770 at 2967.050 kb on - strand, within Psest_2770 at 2967.285 kb on + strand at 2967.285 kb on + strand at 2967.286 kb on - strand at 2967.286 kb on - strand at 2967.286 kb on - strand at 2967.286 kb on - strand at 2967.308 kb on - strand at 2967.511 kb on + strand at 2967.511 kb on + strand at 2967.511 kb on + strand at 2967.511 kb on + strand at 2967.511 kb on + strand at 2967.512 kb on - strand at 2967.512 kb on - strand at 2967.512 kb on - strand at 2967.514 kb on - strand at 2967.560 kb on - strand at 2967.560 kb on - strand at 2967.560 kb on - strand at 2967.677 kb on - strand, within Psest_2771 at 2967.677 kb on - strand, within Psest_2771 at 2967.677 kb on - strand, within Psest_2771 at 2967.947 kb on + strand, within Psest_2771 at 2968.072 kb on + strand, within Psest_2771 at 2968.176 kb on + strand, within Psest_2771 at 2968.455 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbenicillin 0.008 mg/ml remove 2,964,410 + -1.7 2,964,449 + Psest_2769 0.12 +0.2 2,964,449 + Psest_2769 0.12 +0.8 2,964,449 + Psest_2769 0.12 +1.3 2,964,450 - Psest_2769 0.12 +0.7 2,964,542 + Psest_2769 0.33 -0.4 2,964,542 + Psest_2769 0.33 +2.3 2,964,543 - Psest_2769 0.33 -0.3 2,964,543 - Psest_2769 0.33 +1.2 2,964,543 - Psest_2769 0.33 +0.1 2,964,585 - Psest_2769 0.43 +2.3 2,964,585 - Psest_2769 0.43 -0.8 2,964,617 + Psest_2769 0.50 -3.4 2,964,680 + Psest_2769 0.65 -0.2 2,964,680 + Psest_2769 0.65 +2.6 2,964,680 + Psest_2769 0.65 +0.1 2,964,681 - Psest_2769 0.65 +1.6 2,964,681 - Psest_2769 0.65 +1.4 2,964,681 - Psest_2769 0.65 -0.7 2,964,681 - Psest_2769 0.65 +1.7 2,964,681 - Psest_2769 0.65 -2.8 2,964,809 - +0.8 2,964,809 - +0.7 2,964,838 + -0.0 2,964,838 + -0.8 2,964,838 + -0.3 2,964,838 + -1.1 2,964,839 - +0.9 2,964,839 - +0.5 2,964,839 - +0.2 2,964,926 + +1.8 2,964,926 + -1.3 2,964,927 - -2.3 2,965,022 + -2.4 2,965,023 - -0.8 2,965,023 - +0.6 2,965,023 - -2.1 2,965,077 + -0.8 2,965,128 + -1.0 2,965,129 - -0.3 2,965,243 + +0.1 2,965,243 + -1.2 2,965,243 + +1.6 2,965,243 + -0.7 2,965,243 + -0.3 2,965,243 + +0.1 2,965,243 + +0.8 2,965,243 + -2.7 2,965,243 + -1.5 2,965,244 - -0.3 2,965,244 - +2.0 2,966,137 + Psest_2770 0.43 +0.3 2,966,137 + Psest_2770 0.43 +1.4 2,966,137 + Psest_2770 0.43 +0.1 2,966,138 - Psest_2770 0.43 +0.9 2,966,138 - Psest_2770 0.43 +1.8 2,966,138 - Psest_2770 0.43 -0.6 2,966,138 - Psest_2770 0.43 +0.2 2,966,138 - Psest_2770 0.43 -1.1 2,966,138 - Psest_2770 0.43 -1.1 2,966,138 - Psest_2770 0.43 -0.3 2,966,138 - Psest_2770 0.43 -0.4 2,966,138 - Psest_2770 0.43 -1.2 2,966,138 - Psest_2770 0.43 -1.7 2,966,307 - Psest_2770 0.51 -1.6 2,966,307 - Psest_2770 0.51 -1.0 2,966,307 - Psest_2770 0.51 -0.6 2,966,629 + Psest_2770 0.64 -0.6 2,966,629 + Psest_2770 0.64 -1.2 2,966,759 - Psest_2770 0.70 +0.7 2,966,798 + Psest_2770 0.71 -2.4 2,966,799 - Psest_2770 0.71 -2.2 2,966,799 - Psest_2770 0.71 -1.8 2,967,043 - Psest_2770 0.82 +1.8 2,967,043 - Psest_2770 0.82 +0.3 2,967,049 + Psest_2770 0.82 +1.2 2,967,050 - Psest_2770 0.82 -2.1 2,967,285 + -2.3 2,967,285 + -1.4 2,967,286 - +1.7 2,967,286 - +1.2 2,967,286 - -1.7 2,967,286 - -0.4 2,967,308 - +0.2 2,967,511 + +0.4 2,967,511 + -1.2 2,967,511 + +0.4 2,967,511 + +1.2 2,967,511 + +0.3 2,967,512 - -1.8 2,967,512 - -0.1 2,967,512 - -0.3 2,967,514 - +0.7 2,967,560 - +1.2 2,967,560 - -1.9 2,967,560 - -3.0 2,967,677 - Psest_2771 0.17 +1.5 2,967,677 - Psest_2771 0.17 +0.6 2,967,677 - Psest_2771 0.17 -2.4 2,967,947 + Psest_2771 0.52 +1.0 2,968,072 + Psest_2771 0.69 +0.1 2,968,176 + Psest_2771 0.82 -1.0 2,968,455 + +1.2
Or see this region's nucleotide sequence