Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1337

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,441,851	+		Psest_1336	0.47	-0.8
1,442,754	-				+2.0
1,442,841	-				+0.5
1,442,841	-				-2.4
1,442,859	-				-1.3
1,442,899	+				+1.1
1,442,899	+				+2.6
1,442,899	+				+0.5
1,442,899	+				-0.9
1,442,899	+				-1.9
1,442,900	-				+1.5
1,442,918	+				+1.0
1,442,918	+				+0.4
1,442,918	+				-0.2
1,442,918	+				+0.8
1,442,918	+				+0.8
1,442,919	-				+1.3
1,442,919	-				-0.5
1,442,919	-				+1.7
1,442,919	-				-1.3
1,442,919	-				+0.4
1,442,919	-				-0.2
1,442,919	-				+0.4
1,442,919	-				+0.3
1,442,938	+				+1.0
1,443,012	+				+1.1
1,443,012	+				+0.1
1,443,012	+				+0.3
1,443,013	-				+0.4
1,443,013	-				+1.1
1,443,013	-				-0.3
1,443,013	-				-2.4
1,443,096	+		Psest_1337	0.14	+1.2
1,443,096	+		Psest_1337	0.14	-1.6
1,443,096	+		Psest_1337	0.14	-0.3
1,443,097	-		Psest_1337	0.14	-0.3
1,443,132	+		Psest_1337	0.16	+0.8
1,443,201	+		Psest_1337	0.20	+2.5
1,443,291	+		Psest_1337	0.25	+0.9
1,443,291	+		Psest_1337	0.25	+0.3
1,443,292	-		Psest_1337	0.25	+0.0
1,443,458	+		Psest_1337	0.35	-2.3
1,443,766	+		Psest_1337	0.52	+1.0
1,444,753	-				-0.3
1,444,753	-				-0.5
1,444,777	-				+2.5
1,444,843	+				+1.9
1,444,894	+				-0.3
1,444,894	+				+0.6
1,444,895	-				-0.6
1,444,895	-				+0.2
1,444,895	-				-1.8
1,444,895	-				+0.1
1,444,930	+				-1.0
1,444,931	-				-0.3
1,445,142	+		Psest_1338	0.18	-0.0
1,445,142	+		Psest_1338	0.18	+0.9
1,445,142	+		Psest_1338	0.18	-0.8
1,445,142	+		Psest_1338	0.18	+0.1
1,445,143	-		Psest_1338	0.18	-0.4
1,445,143	-		Psest_1338	0.18	+1.1
1,445,143	-		Psest_1338	0.18	+0.6
1,445,143	-		Psest_1338	0.18	+0.3
1,445,143	-		Psest_1338	0.18	+0.6
1,445,186	-		Psest_1338	0.21	-0.9
1,445,186	-		Psest_1338	0.21	+1.3
1,445,263	-		Psest_1338	0.26	-1.2
1,445,263	-		Psest_1338	0.26	+0.3
1,445,286	+		Psest_1338	0.27	-0.2
1,445,287	-		Psest_1338	0.27	+1.2
1,445,366	+		Psest_1338	0.32	+0.7
1,445,559	+		Psest_1338	0.44	+0.7
1,445,559	+		Psest_1338	0.44	+2.2
1,445,560	-		Psest_1338	0.44	+0.6
1,445,592	+		Psest_1338	0.46	-1.1
1,445,592	+		Psest_1338	0.46	-2.8
1,445,592	+		Psest_1338	0.46	+0.9
1,445,592	+		Psest_1338	0.46	+0.0
1,445,593	-		Psest_1338	0.46	-0.7