Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1335

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
1,438,703	+		Psest_1334	0.84	-1.8
1,438,877	+				+0.1
1,438,895	+				+0.7
1,438,895	+				+0.7
1,438,896	-				+0.6
1,438,896	-				-2.0
1,438,896	-				-0.3
1,438,899	+				-1.8
1,438,900	-				-0.3
1,438,900	-				-1.7
1,438,900	-				-0.4
1,438,938	+				-0.2
1,438,938	+				+2.0
1,438,939	-				-0.0
1,438,939	-				-1.7
1,438,939	-				+0.5
1,439,037	+				+0.7
1,439,047	-				-1.4
1,439,180	+				-0.1
1,439,217	+				+0.2
1,439,217	+				+0.4
1,439,221	+				-0.5
1,439,221	+				+0.7
1,439,283	+				-1.4
1,439,284	-				+0.4
1,439,284	-				-0.3
1,439,347	+				-1.9
1,439,348	-				-2.0
1,439,348	-				-0.5
1,439,359	+				-0.1
1,439,359	+				+1.7
1,439,359	+				+0.2
1,439,359	+				+0.8
1,439,359	+				+0.1
1,439,360	-				+1.3
1,439,360	-				-0.2
1,439,360	-				+0.6
1,439,360	-				-1.2
1,439,387	-		Psest_1335	0.11	-1.7
1,439,387	-		Psest_1335	0.11	-0.2
1,439,518	+		Psest_1335	0.19	-1.4
1,439,518	+		Psest_1335	0.19	-2.5
1,439,519	-		Psest_1335	0.19	-0.9
1,439,519	-		Psest_1335	0.19	+0.1
1,439,519	-		Psest_1335	0.19	-1.5
1,439,519	-		Psest_1335	0.19	-1.0
1,439,519	-		Psest_1335	0.19	+0.7
1,439,573	+		Psest_1335	0.22	-1.3
1,439,574	-		Psest_1335	0.22	-1.2
1,439,574	-		Psest_1335	0.22	-0.1
1,439,609	+		Psest_1335	0.25	-0.9
1,439,609	+		Psest_1335	0.25	+0.7
1,439,609	+		Psest_1335	0.25	-0.4
1,439,609	+		Psest_1335	0.25	-2.4
1,439,609	+		Psest_1335	0.25	-1.2
1,439,609	+		Psest_1335	0.25	-0.5
1,439,609	+		Psest_1335	0.25	+0.1
1,439,609	+		Psest_1335	0.25	-0.1
1,439,609	+		Psest_1335	0.25	+2.4
1,439,610	-		Psest_1335	0.25	-1.2
1,439,729	-		Psest_1335	0.32	-1.0
1,439,834	-		Psest_1335	0.38	-0.6
1,439,834	-		Psest_1335	0.38	-0.8
1,439,834	-		Psest_1335	0.38	-1.0
1,439,834	-		Psest_1335	0.38	+0.5
1,439,952	-		Psest_1335	0.45	-0.4
1,439,952	-		Psest_1335	0.45	-1.5
1,439,952	-		Psest_1335	0.45	-1.9
1,439,952	-		Psest_1335	0.45	-0.4
1,439,952	-		Psest_1335	0.45	-1.6
1,439,975	-		Psest_1335	0.46	-2.1
1,439,975	-		Psest_1335	0.46	-2.0
1,439,975	-		Psest_1335	0.46	-0.5
1,439,983	+		Psest_1335	0.47	-0.3
1,439,983	+		Psest_1335	0.47	-0.4
1,439,983	+		Psest_1335	0.47	-2.7
1,439,983	+		Psest_1335	0.47	+0.5
1,439,983	+		Psest_1335	0.47	-1.4
1,439,983	+		Psest_1335	0.47	-0.6
1,439,983	+		Psest_1335	0.47	-0.6
1,439,984	-		Psest_1335	0.47	-0.3
1,439,984	-		Psest_1335	0.47	+0.2
1,439,984	-		Psest_1335	0.47	-0.2
1,439,984	-		Psest_1335	0.47	-2.3
1,439,984	-		Psest_1335	0.47	-0.6
1,439,984	-		Psest_1335	0.47	-1.7
1,439,984	-		Psest_1335	0.47	-1.4
1,439,984	-		Psest_1335	0.47	-1.4
1,439,984	-		Psest_1335	0.47	-0.2
1,440,088	+		Psest_1335	0.53	-0.7
1,440,088	+		Psest_1335	0.53	+0.8
1,440,089	-		Psest_1335	0.53	+1.7
1,440,351	+		Psest_1335	0.68	+1.5
1,440,352	-		Psest_1335	0.68	+0.2
1,440,352	-		Psest_1335	0.68	-0.6
1,440,476	+		Psest_1335	0.76	+0.5
1,440,477	-		Psest_1335	0.76	+1.1
1,440,535	+		Psest_1335	0.79	-0.6
1,440,535	+		Psest_1335	0.79	-0.5
1,440,535	+		Psest_1335	0.79	-0.2
1,440,592	+		Psest_1335	0.83	-0.2
1,440,877	-				-1.6
1,440,877	-				+1.9
1,440,883	+				+1.0
1,440,883	+				+0.3
1,440,883	+				+0.4
1,440,883	+				+0.7
1,440,883	+				+0.0
1,440,883	+				-2.4
1,440,883	+				-1.2
1,440,883	+				-0.6
1,440,884	-				+1.4
1,440,884	-				+0.4
1,440,884	-				-0.6
1,440,884	-				-2.5
1,440,884	-				+0.5
1,440,928	+				+0.8
1,440,928	+				-2.3
1,440,928	+				+0.9
1,440,928	+				+2.4
1,440,928	+				+1.5
1,440,929	-				-1.3
1,440,929	-				-0.0
1,440,932	+				+0.5
1,440,933	-				-0.4
1,440,971	+				+0.0
1,440,972	-				-0.4
1,441,004	+				+0.0
1,441,053	-				+0.1
1,441,152	+				-0.1
1,441,152	+				+0.7
1,441,152	+				-0.5
1,441,153	-				+0.5
1,441,153	-				-0.9
1,441,153	-				-2.7
1,441,153	-				-1.6
1,441,153	-				+1.5
1,441,158	+				+1.7
1,441,158	+				+1.4
1,441,158	+				-0.3
1,441,159	-				+0.9
1,441,159	-				+0.5
1,441,159	-				-0.2
1,441,235	+		Psest_1336	0.10	-0.3
1,441,236	-		Psest_1336	0.11	-1.1
1,441,236	-		Psest_1336	0.11	-1.0
1,441,271	+		Psest_1336	0.13	-0.5
1,441,271	+		Psest_1336	0.13	-0.4
1,441,271	+		Psest_1336	0.13	+1.0
1,441,271	+		Psest_1336	0.13	+0.0
1,441,271	+		Psest_1336	0.13	+0.2
1,441,271	+		Psest_1336	0.13	-1.0
1,441,271	+		Psest_1336	0.13	-0.0
1,441,271	+		Psest_1336	0.13	-1.2
1,441,271	+		Psest_1336	0.13	-2.0
1,441,272	-		Psest_1336	0.13	+1.5
1,441,272	-		Psest_1336	0.13	-0.6
1,441,272	-		Psest_1336	0.13	-0.7
1,441,272	-		Psest_1336	0.13	-1.9
1,441,272	-		Psest_1336	0.13	-1.8
1,441,272	-		Psest_1336	0.13	-0.5
1,441,272	-		Psest_1336	0.13	-1.2
1,441,340	+		Psest_1336	0.17	+1.0
1,441,341	-		Psest_1336	0.17	-1.0
1,441,502	+		Psest_1336	0.26	+0.5
1,441,511	+		Psest_1336	0.27	+0.2
1,441,568	+		Psest_1336	0.30	+0.4
1,441,569	-		Psest_1336	0.30	+0.5
1,441,569	-		Psest_1336	0.30	-0.1
1,441,569	-		Psest_1336	0.30	+0.8
1,441,851	+		Psest_1336	0.47	-0.8