Experiment: RCH2_defined_1percent_glucose with Chloride 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS24175 and BWI76_RS24180 are separated by 70 nucleotides BWI76_RS24180 and BWI76_RS24185 are separated by 168 nucleotides BWI76_RS24185 and BWI76_RS24190 are separated by 105 nucleotides
BWI76_RS24175: BWI76_RS24175 - ornithine decarboxylase, at 5,039,952 to 5,042,090
_RS24175
BWI76_RS24180: BWI76_RS24180 - hypothetical protein, at 5,042,161 to 5,042,359
_RS24180
BWI76_RS24185: BWI76_RS24185 - membrane protein, at 5,042,528 to 5,043,244
_RS24185
BWI76_RS24190: BWI76_RS24190 - tRNA-Phe, at 5,043,350 to 5,043,425
_RS24190
Position (kb)
5042
5043 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5041.172 kb on + strand, within BWI76_RS24175 at 5041.187 kb on - strand, within BWI76_RS24175 at 5041.208 kb on + strand, within BWI76_RS24175 at 5041.216 kb on + strand, within BWI76_RS24175 at 5041.398 kb on - strand, within BWI76_RS24175 at 5041.411 kb on + strand, within BWI76_RS24175 at 5041.580 kb on - strand, within BWI76_RS24175 at 5041.638 kb on - strand, within BWI76_RS24175 at 5041.690 kb on + strand, within BWI76_RS24175 at 5041.839 kb on + strand, within BWI76_RS24175 at 5041.920 kb on + strand at 5042.011 kb on - strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.013 kb on + strand at 5042.021 kb on - strand at 5042.021 kb on - strand at 5042.036 kb on + strand at 5042.057 kb on - strand at 5042.138 kb on + strand at 5042.141 kb on + strand at 5042.160 kb on + strand at 5042.249 kb on + strand, within BWI76_RS24180 at 5042.257 kb on - strand, within BWI76_RS24180 at 5042.372 kb on + strand at 5042.407 kb on + strand at 5042.407 kb on + strand at 5042.528 kb on + strand at 5042.692 kb on + strand, within BWI76_RS24185 at 5042.722 kb on - strand, within BWI76_RS24185 at 5042.773 kb on + strand, within BWI76_RS24185 at 5042.781 kb on - strand, within BWI76_RS24185 at 5042.843 kb on + strand, within BWI76_RS24185 at 5042.999 kb on - strand, within BWI76_RS24185 at 5043.130 kb on - strand, within BWI76_RS24185 at 5043.138 kb on - strand, within BWI76_RS24185
Per-strain Table
Position Strand Gene LocusTag Fraction RCH2_defined_1percent_glucose with Chloride 400 mM remove 5,041,172 + BWI76_RS24175 0.57 -0.7 5,041,187 - BWI76_RS24175 0.58 +0.2 5,041,208 + BWI76_RS24175 0.59 -0.1 5,041,216 + BWI76_RS24175 0.59 -0.3 5,041,398 - BWI76_RS24175 0.68 +0.6 5,041,411 + BWI76_RS24175 0.68 -2.5 5,041,580 - BWI76_RS24175 0.76 -0.2 5,041,638 - BWI76_RS24175 0.79 +0.1 5,041,690 + BWI76_RS24175 0.81 +0.5 5,041,839 + BWI76_RS24175 0.88 -0.2 5,041,920 + -0.8 5,042,011 - +0.4 5,042,013 + -0.3 5,042,013 + +0.1 5,042,013 + -0.7 5,042,021 - +0.5 5,042,021 - +1.6 5,042,036 + +0.3 5,042,057 - -0.2 5,042,138 + +0.4 5,042,141 + -2.9 5,042,160 + +0.3 5,042,249 + BWI76_RS24180 0.44 -0.9 5,042,257 - BWI76_RS24180 0.48 -0.8 5,042,372 + +0.2 5,042,407 + +0.1 5,042,407 + -1.2 5,042,528 + -1.0 5,042,692 + BWI76_RS24185 0.23 +1.1 5,042,722 - BWI76_RS24185 0.27 -0.5 5,042,773 + BWI76_RS24185 0.34 +0.2 5,042,781 - BWI76_RS24185 0.35 -0.6 5,042,843 + BWI76_RS24185 0.44 -0.0 5,042,999 - BWI76_RS24185 0.66 +0.5 5,043,130 - BWI76_RS24185 0.84 +0.2 5,043,138 - BWI76_RS24185 0.85 +0.9
Or see this region's nucleotide sequence